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3 genomes BUD2527 3 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC2081

- -

Hmu0045

Hut0834

- - -

Pairwise sequence scores
Consensus score2204 Hut0834 rrnAC2081 Hmu0045
1156Hut0834 2048 727 658
1439rrnAC2081 727 2190 1001
1523Hmu0045 658 1001 2254

306 symbols
consensus       MGIKCSVLGHAYGETTVERDREEQGSEVVITIREVETCERCGNTRVVSENKEVTAIETPD
#oth            112111.1..21.......1.....1...1..1.1...1...21.1....1...1.1..2
Hut0834         :::::::F::DF:::::::::::::N:::S::::::::R:::E:::::::T:::T:K::E
rrnAC2081       ::L:::::::K::::::::E::::::::::::Q:R::::::::::I:::::::::::::S
Hmu0045         ------::::::::::::::::::::::::::::::::::::TE::::::::::::::::

consensus       DIATA----ESEAEAAETDAQPEAEPAAAAAEPADEGDDVADA-DSEDDPAAAEEDSASD
#oth            .2112111111.2111111221121112222112111221212112211.2211221212
Hut0834         :V::-:::::E::T:D:S:G::D:T:::TDIVD:EA:EP::E::----::TN::---P::
rrnAC2081       :::SDLVED:::S:T:::ESP::D:::DS::::T:::TERS:GW::V:::VK:PG::GVG
Hmu0045         :TE::::::A::G:::T:::ES:S:SDT:RE::S::E:::E:D::T::V:::G::L:::E

consensus       DNGGDEEPADPEAD-----DAEIIDDDDDEGSG----DDELAEPTEDPEIDDAEEDERLD
#oth            2211212.22121211111111.11121212221111.21121.1221122121221222
Hut0834         ETAQY:S::ED---::::::GV:LE:::E----::::::PVR::G:W::ST:P::ST:T:
rrnAC2081       :::::D::V::S::::::::::::::S:S:::::::::V::D:::TTVDVP:::SE:PVT
Hmu0045         IV::E:T:ST:::EAEPDTG:::::AES::PVSEEAV:E:::D::V:::::EQDG::Q:G

consensus       EGAAAQDTEEIDADDPDADDALIIDEDADDESEQADRQPGEWPDEPDDDADEWSPDTIDL
#oth            212222212121221.22112112112211212221111.111211112212.1121222
Hut0834         T:S:G:T:T:SEDVE:SVGPD:SV:VTT::G:PS:EPAE:---SST::E:EV::STDP::
rrnAC2081       :----------:ET::EK::G::LG:E:ES::TGD:::::::::::G::G:G:::E:MPV
Hmu0045         G::P:V:::::::::::::::M:::::D::PV::G::::::::E:::TGD:::Q::::GT

consensus       ---GDADDAVEATDTGTNTVPDGQFRCPECGFTTEVESSSLRAGDFCPECHRGMLVHEAE
#oth            1112.2122112121212.111.1.1.1..1...2...1...2..1..1..2.2.12121
Hut0834         ::::::QQ:::DG::::::IV::::::T::::::P:::::::E::Y::D::Q::::I::Q
rrnAC2081       DSGT:D:SG::S:SDSAV:::E:E:A::::::::::::T::::::::::::K:S:ITRG:
Hmu0045         :::I:E::EEQ::E:T:L::::::::::::D:::L:::::::R::::::::::T::::P:

consensus       D-----
#oth            211111
Hut0834         -:::::
rrnAC2081       E:::::
Hmu0045         :ETRKE