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3 genomes BUD2536 3 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC0431

- -

Hmu1107

Hut0464

- - -

Pairwise sequence scores
Consensus score7692 Hut0464 rrnAC0431 Hmu1107
4969Hut0464 7944 3395 3495
5324rrnAC0431 3395 7202 3987
5514Hmu1107 3495 3987 7871

1081 symbols
consensus       MSQLRGYLDDNDELERAAEWAQRWYHGALGAGLLGFMLWNRVRPWNNFIVDGEVLFSGND
#oth            ..12111121221111.21122211.222212.1..11.1.1.2.1111...11.11...
Hut0464         ::V:DE:VSEDSSAS:::::LFT:G::L:I:::F:::F:V:A:T::R:V:::KI:L::::
rrnAC0431       :::S:::::::P:::S:L:::E::::VPVLLV:::::::::::S:E::::::::::::::
Hmu1107         :::W::R:E:S::::::VDLV:QY::L:F::L::::T::::::::::Y::::::::N:::

consensus       AWYHYRSTAYTVRNWPATMPFDPWTYFPHGTDVGQFGTLLDQLIATVALIVGLGSPSENT
#oth            ....1.112.1.2...2........1..2..21.....12..12..1...1......121
Hut0464         ::::L:QIS:::S:::S::::::::E::T::F::::::IM::::::A:::::::::::EL
rrnAC0431       ::::::::Q:V:N:::::::::::::::Y::ST:::::::::IV::::::I:::::::Q:
Hmu1107         ::::::::::::::::Q::::::::::::::::::::::F:::L:::::::::::::D::

consensus       IRLVLLFAPAVFGSLIAVPTYLIGRRLGGRLGGVIAAAVLALSAGGLLQRSRVGFSDHHV
#oth            11112..1.1.1121221...22.1.1...1..12.22.2.1.2.21....2..11..11
Hut0464         ::::T::S:V::::A:I::::YL:K:M::::::I:::I:::::S:V:::::L::IA::Q:
rrnAC0431       VAMT:::::::L:T:V::::::V:::::::::::T:VT:M:F:T::::::::::::::::
Hmu1107         ::::V:::::::AV:TGI:::V::::::::A:::V:L::F:::::SI::::M:::::::I

consensus       AEALFQALGVLGIMVAVRVAARDKPVYEQFAERDIDALRRTLGWSALAGVAIALYLWVWP
#oth            ..1...211...211..2..2111.1..1.21.1211..2112.1111..1111...1..
Hut0464         :::::::VA::::VI:::::QEE:::::L::::NWG::::P:::G:VG::GL:::::L::
rrnAC0431       ::::::I:::::V::::S:::::::I::::I::::::::D:IS::M:::::::M::::::
Hmu1107         ::V:::T:::::M::::T::R::R::::::LD::F:G::S::V:::::::::T:::::::

consensus       PGVLLLGILGVYLLIQLCIEYVRGESPEHTAIAGAIALAVAGVLSAIRINAAEFRAGAQS
#oth            111..1.11..12121.21111111....11.11.2222111.11222.2121122222.
Hut0464         :AI::I:V::::VT:::P:V:L:::::::VG:VT:TIF:::::::LLS:Q:VN:NMVQL:
rrnAC0431       :::::::::::FF:LR::L:::HDS:::::::::::TMVT:A:V::S:::VL:IT:T:::
Hmu1107         F:::::::V:::::F::T::F::::::::::::::V::G:T:::MF:P:T:::::V:VF:

consensus       LLQPGLAFAVAAGCVFMAWLARFWDRREIDAWQYPATVFGILALGVVLAALATPDLFDLF
#oth            .11.1.11111111111.....1112.122222..1.1111.22.1.122121.11222.
Hut0464         :A::::S::G::WSLGL:::::E:::::LS::::::::::G:GV::::FV:VL::::WY:
rrnAC0431       :::::::L::GF:::::::::::MEQ::YGQYV::::::::::F:A::M:VL::::WSF:
Hmu1107         ::H:T:::G::::::::::::::::D:D::TVF::L:ILS::V::::F:Q::::GIY:::

consensus       ARNILRIIG--LAINP-SATAGTVGEATPLRRAADALFRRHGFAPIIAGAGGALLVGRQL
#oth            22122.12.11122211.21.1.11.21.1122222.1221.11221.111121212212
Hut0464         FDQ:::FV:::F:F::H:DS::::A:V:::PGGI:S:L:YY:AV:L:::::VGIS:IH:Y
rrnAC0431       TN:VM:::::::TT--::E::N:::::S:::N:GV-::D:::::V:V::I::L::L:K:F
Hmu1107         :::LV::F:GV:G:G::::::::I::I::M::P:I:::QM::::TF::L:A:::V:V:N:

consensus       ISDDAEPEQLLVVVWAVFILAATITQARFAYYLAVPIAGLSALVVGAFIRWLADRDRSAD
#oth            21122211211.1..11.211..2..2...1.121.112.1121.122211122211.22
Hut0464         F::ELK::L:F:G::F::M::::L::S:::V:FP::A:T::::::----T::FQ:L::VS
rrnAC0431       L::::PA:EM::::::::::L::F::R::::::VA:::V::GM:::R::::F---:F:::
Hmu1107         :GSKV::Q::::::::A:VT:::::::::::::::::G::T:YA:::VL:Y:::G:::IV

consensus       DG--INIETYQVLTILAVALGIVAPMVALASPTVEA--GQNNPGQGIAGWDDSLDWMNNN
#oth            1111222.1...1.11212222.2.11121111122111222..2112..221.1..221
Hut0464         ES::SDL:::::::::G:VT:L:L:::-::::::LETS::::::-:V:::ES::::::E:
rrnAC0431       ::::--::Y:::M:::T:L:V::V:LF:FGTTP::::::STG::PS:Q:::E::Q::EG:
Hmu1107         ::DG::V:::::::VA:I:VLV::::::V::::DID::RYDS:::::E::S:G::::Q:H

consensus       TPAEGAYGGAGNA-ELDHYGTYERQDDFDYQDGQYGVLSWWDYGHWITARAERIPNANPF
#oth            ...1.21.1111111.11...11122..1.21.1...1..........2211.1.2....
Hut0464         :::V:N:::::::D:::F::::::T:::E:P::A:::I::::::::::QE:::::V::::
rrnAC0431       ::::::::SG:D::T:E::::::::E:::::E::::::::::::::::T::::V::::::
Hmu1107         :::::TF:::S:-::::::::FPNVG::::E::::::::::::::::::QGQ:::T::::

consensus       QQGAEEAAAFLLAQNETQANDALDIVSENESDAETRYAAVDWKMAETNGNLN----GKFF
#oth            .111111.2..2.2..1..111.1211.1211.2.1.21......11..1221111...1
Hut0464         :GN::::::::M:T::S::G:::E:::::::::T:Q::M::::::TA::GFQSYRW:::G
rrnAC0431       :::T:TV:P::V::::::::NI::STD:D--::K:::I::::::::::::::::::::::
Hmu1107         ::::T:::N::::P::::::::::T::::S:E:::::V::::::::::::VG::::::::

consensus       APAAFAD--NVSAQDYYSRIYGQAQAGARRPS-----FTHQRQAYYESMAVRLYRYHGSA
#oth            ..22.2.112.1221..12212121212121111111122.2..1.11121....1....
Hut0464         ::S::L:::::::ST::RV:R::::::DS:::VLQQWY:V:K::F:::::::::::::::
rrnAC0431       :::T:::::G:EPG:::::M:I:S:D:::QIT::::::--:Q:::::T:TA::::F::::
Hmu1107         ::PN:Y:VSE::Q:::::PV:SSRAQSL:G::::::::V:::::::N:TV::::::::::

consensus       AEPRPI----------VVDWENKQTLQGRQGRGALANVAARNGQRQAQAIRQFNSREEAR
#oth            11121111111111111....22111111122222211222211122112111212.1.1
Hut0464         :STTDVPGINTRGRIP:::::QT:L:NR:T:ETE::::P:::QNGT:::L:W:::::::E
rrnAC0431       :::Q:::::::::::::::::::::G::A:Y:::PT:EQEPE::::G:IV:::E:M:Q::
Hmu1107         V:::::::::::::::G::::PS-::::::-------::QVD:::---::F:TQTL::::

consensus       AYVAEDATAQIGGIGANPSERVSAMEHYRLVGSSEQ---SAFASNP----------ALGL
#oth            1.111.2.111..2.22...1.1.11.....12..1111112112111111111112211
Hut0464         ::::::G::::::L:KI:::P:::LK:::::QV:::NQG:VV::Q:::::::::::G:::
rrnAC0431       Q::E:::::::::F:D:::::::::::::::::::T:::E::PN::::::::::::----
Hmu1107         ::T:N:S:SSV:::::L:::::P:::::::::T::::::::T::GQYNRGLLQSAA:S::

consensus       GYQRN--NEQARYQSDVNLRTAESG--------------TLHDPASAWAKIFERVPGATV
#oth            22112111222211121221222111111111111111122222211.2.2........1
Hut0464         LV:::LQ:::VQ::TG::W::LL::::::::::::::::::SE:Y:::T:T:::::::::
rrnAC0431       -----::----::::----------::::::::::::::------::::::::::::::I
Hmu1107         ::::V:::ST:ECT:::T::V::::PGQIACLPEGIEQQVF::T:PQ:L:V:::::::::

consensus       EGTGPANATVRASVEMRNPAANKTFTYRQRTRTDDDGNFTMTVPYSTTGYDAFGTDNGYT
#oth            .....1.11.2.1.1.21.1211..1.1.212.221.2.1..1.....1..221112...
Hut0464         :::::::TN:T:::::EM:N:::::::::HAE:GE::E::::L:::::D:::VS:ED:::
rrnAC0431       ::::::::::::A:Q:::::T::::V:::::Q::QN:::E:::::::::::DW:::E:::
Hmu1107         :::::E::::Q:::::Y:::SDE::::T:Q:::S:::T:::::::::::::E::P:::::

consensus       NVSVRANGSYQFA---AGEANNRTRTQ--FNGTTEVSEGQVIGEDDDAAEVELNKS----
#oth            ......121.1.211112222.212.111221111.1.1..1.2.122111112211111
Hut0464         ::::::::::E::TSPTL:TT:E:M::YVY:D:A::::E::::T::SVV:AD:T::VMLE
rrnAC0431       ::::::ETQ:::T::::IG:::GN::G:::T:A:::T::::::::::::T:::EPV::::
Hmu1107         :::::::S::::R:::::SVD:::L::::WS:::D::::::L:V:EEP::::M:S:::::

consensus       -DINLSASD-TNQDGNNTTDDSRTGETDDGSDNEEGEDESGSLAPTAAPDQETDRAAEAG
#oth            12122221211222.21.12212122.2.122222221222222122222221221212.
Hut0464         R:::TT:::S::ET:Q::::G:D::G:::::T::T:::T::::::VV:S:SS:V:PVTT:
rrnAC0431       :--------::I:Q::G:SGE:::PM:E:--------------------------:::::
Hmu1107         :E:D::P:E:NET::T:::S:TGNS::T::T:GS:TT::TTTST:::T:E::::T:T:S:

consensus       A
#oth            2
Hut0464         T
rrnAC0431       :
Hmu1107         N