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3 genomes BUD2554 3 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC1818

- -

Hmu0784

Hut0363

- - -

Pairwise sequence scores
Consensus score4729 Hut0363 rrnAC1818 Hmu0784
3222Hut0363 4748 2431 2474
3593rrnAC1818 2431 4851 2845
3690Hmu0784 2474 2845 4724

631 symbols
consensus       ---------MSLEWRAAAVAPGGDRPSPETWEPVDVPGRPAAFAGAEAVAYRATFADPRD
#oth            111111111111..1111.2.1112.1111.1.12..1..22.11.1....12..2..11
Hut0363         :::::::::-MN:::::R:E::::::D:A:::::E:::::::::::D:::::S:::::-T
rrnAC1818       MPPRNGPQG::::::G:::::DDEM::::A::::S::S::GQ:::::::::ET::S::::
Hmu0784         ::::::::::::::S:G::D::::P::A:::Q:I::::::TE:VD::::::::::E::::

consensus       AADAHALLVLEGVYAHARVWLNGELLAEHDAYFEPLRVRL--PEAEENELLVECRAPEDR
#oth            2211.12...1.1...1...11111121.........11.11122111111....2....
Hut0363         :E:E::T:::::::::::::::DTF:G::::::::::L::DAAL:A:::::::::P::::
rrnAC1818       ES:::T::::S:I:::T:::C:::::TS::::::::::::::::S::YRIV:::::::::
Hmu0784         P:Q:::V::::::::::::::D:::I::::::::::::P::::VG:D::::::::R::::

consensus       FGGIYATDRVPDERAVPGIWWDARIETRPDPCVADLSVAPRV---DDEDASVDVRATVLT
#oth            ...212..21.2122.......122..21.12121.112.11111.2111111.2..111
Hut0363         :::S:E::E::::L::::::::VDV::YT:HHIL:::AR:::::::::::RF:::::::A
rrnAC1818       :::LH:::QL:S::C::::::::TL::::::::SE:::Q:QLSEA:VT::::::S::I::
Hmu0784         :::::D:::::TASS::::::::::::H:::Y::::N:::::::::G:ST::E:E:::V:

consensus       EEPLDDRLTLSLRPEGDVRGGGMMDRARVDTDAG-RATVTYTIDVRDPSLWWPHDRGEQN
#oth            111....1.1.11.1.21..1...1.11121.11111..1111.1...1......2.1.2
Hut0363         :TA::::::F:VK:::SR::R:::::TAIEA:::E:T::E::::I:::A::::::L::::
rrnAC1818       :::::::I:::::::::::::::::::::S::EE:T::::::M::::::::::::::::S
Hmu0784         D:::::::::::::T:E:::::::N:::::::::::::::HE:::::::::::::V:S:P

consensus       RYVIRAKLADDERTVTTGLRSVSYDES-GLRVNGQRVPARGVTLRDATVEDVARAVDANA
#oth            ..12....2...1111...11.11.111..1..122111...1.21211..12....1..
Hut0363         ::::::::D:::::L::::C::DD:::D:::::DTPMT::::G:LA:EP::IE::::L::
rrnAC1818       :::L::::G:::HS::::::T::::G-:::::::ES::V:::::::P:::::::::::::
Hmu0784         ::AV:::::::::::E::::::::::::::L:::::::::::::V:G:::::R:::::::

consensus       NLVRAHAHALSPAVYEACDEAGVLVWQDLPLTGPGGFDAERGAALAARLVAAYARHPSFA
#oth            ....11.122..1.11.1.12...1......1...2..21.121.22..122122..11.
Hut0363         ::::::::VP:::::::A:::::::::::::::::P::I:::RD:TG:::S::EH::G::
rrnAC1818       ::::VR:QGT::E:AC:::DH:::L::::::S:::S::T:::T::::::T:T::Q:::::
Hmu0784         ::::::::::::::::::::Q::::::::::::::::::D:A:::LE:::WSRR::::L:

consensus       AVSVHDDPVPDYADGLGSGFLDRLRFRWRAWRADYDGAPAERVAAAV-DEVPTFPVVGPP
#oth            .11...2.1221111....1...1.1...11..1..211.12..22.1121111.....1
Hut0363         :I:::::::TVSDGP::::::::::L:::RF:::::HE:::T:::E:P:GIV:L::::::
rrnAC1818       ::G:::E::SP::::::::::::::::::::::G::S:D::S::S::::S::::::::::
Hmu0784         ::::::G:I::::::::::L:::V::::::::::::::::G:::DG::T:::A::::::A

consensus       GIDPDATTLYPGWRYGDAADADWLCDRN-NLDDVVAAFGAGALGANGDDDADGFDRERHD
#oth            ..1...111....11.2.2.221.22.2121221.121...1.1221221221.121211
Hut0363         ::E::::S::::::::Q:V:V:Q:LE::PS::S::GEY:::S::VEDPV:V::::::V::
rrnAC1818       ::::::::::::::::::::LP::YS:F::VS:A::G:::::::TP:SG:SP:::SAC::
Hmu0784         ::::::A:M::::TF:E:R::E:::::Y:G:GT::::::::::-:::::E:TD:EG::RA

consensus       AHVDGGVEDSQAYQASVVATVAERLRRRNADVLVVDSLRDAGDAGMGVLAADGTPKAAFD
#oth            21.1...11...1.11.121.1.2..1.211111111...211....1.12...1.1.12
Hut0363         Y::S::::::::::R::I:::T::::L:GT::::AG::::L:::::::::R:::::D:H:
rrnAC1818       R:::::::A::::::G::RE:::S::::::PLV:::::::V::::::L:T::::E::::S
Hmu0784         :R:::::D::::M:::::G::::T::::D::::A::T::::DG:::::::E::::::::E

consensus       ALASAYEPTQVILADP-APGESDVVVHHDRPTDADATVEWDVNGDREQAEVAIGAAARQT
#oth            2.1111..1.12.1.1111.1111.121.1.12222111.112.111111121112212.
Hut0363         :::::F::V:AM::::R:G::::::::N:L:::VTDRLT:E:G:ETGE:D::::::SSE:
rrnAC1818       V::DS::::::::S:A:::::Q:I::L::::EK::L:::::C::::::::HTV:PF::V:
Hmu0784         R:Q::::::::L:::::T::D:E::LV:::::GGL:::::::D:::::T::E:E:YG:::

consensus       VTTIAIPAGDDVTLAAADADHVVRNRYRI--
#oth            .11122111111.11222222112.2.2211
Hut0363         ::S:S::Q-:AE:ITLSL:G:S:S:T:QL::
rrnAC1818       :D:LTLS:::::::::T:GQT::K:E:::IE
Hmu0784         :::::P:::S:::::V:ID:V:A::::TV::