3 genomes BUD2561 3 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC1640 - - Hmu0860 Hut0391 - - -

Pairwise sequence scores
Consensus score	713	rrnAC1640	Hmu0860	Hut0391
540	rrnAC1640	842	429	314
569	Hmu0860	429	762	360
408	Hut0391	314	360	641

120 symbols
consensus       ---------------MCGNRVEELEARVRELEASVEGLTDELVECKVRLRELEAAVDEDN
#oth            111111111111111.11.......11.11...1..........1...1....21..112
rrnAC1640       MSDVGISVHNGWVTD::::::::::T::::::::::::::::::::::I:::::S:::::
Hmu0860         ::::::::::::::::::::::::::::K::::::::::::::::::::::::S:::::I
Hut0391         ::::::::::::::::SD::::::::K::D:::T::::::::::S::::::::N:::DEL

consensus       GFA-PDAIDADEQAADAA-EADTEATSATAEADNRQEAEAADE---EESEAESESDIIVA
#oth            .121122212112222221.21.1211212111222111221111121212111....1.
rrnAC1640       ::S:A:EP:SE:S::TST:::::PN:ED:N:I:::E:::::S::::T:T:ED::::::::
Hmu0860         :L:::K:T:::::PD:::P:P::::::E:TV::STKQ:DGK::HNR:::::::D::::::
Hut0391         ::EK:VN:ET:V------::DE::SV::S:::TKS::V:DT:D:::----Q:A:::::I: