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3 genomes BUD2563 3 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC0050

- -

Hmu1282

Hut1452

- - -

Pairwise sequence scores
Consensus score1379 Hut1452 rrnAC0050 Hmu1282
905Hut1452 1363 622 695
1027rrnAC0050 622 1419 750
1022Hmu1282 695 750 1425

185 symbols
consensus       ------LDRVDAHRFAPAAPDEEYVYGACAPGWHSAADQADAVDAWIAFMQARGIERVCC
#oth            1111112221111.....111....1.111....11.1221.122..11.1211.1..1.
Hut1452         ::::::--MD::Y::::::::::::H::A:::::::::::V::S:::E::RD:::R::::
rrnAC0050       ::::::MPI:NP:::::::SN::::::S::::::T::THQ::L:D:::H:::HD::::::
Hmu1282         MSESRR::::::::::::G::::::::::C:::::T::PD:::EE::::::E::::::L:

consensus       LLPGAQLDDAGANLRRYRAAFGADNVRHVPIADHRLADADRLEDDILPFLEESVRADEPV
#oth            ..1.211.22111121.22...221.2.1.22.12.21222.122....1111122111.
Hut1452         :::::DA:GC:Y::EE:T::::E:::V:A:LL:RQ:G:STV::ET::::::::::R::::
rrnAC0050       ::::Q:::::::::::::E::::SS:::::VP::::IAQ:::H:::::::VDACETE:R:
Hmu1282         ::S:T:::QTE:STG::VR:::GE::E:::::::H::::ET::TE::::I::::D::Q::

consensus       VVHCLAGIGRTGQVLAAWLVYGRGYDPDRAIETVQEMGRDPREAIEAGRATEAELHDLLS
#oth            ..11.1.1....1........111.2.12.1...211..2.2111111211121.221.1
Hut1452         ::QG:S:L:::::::::::::::::Q::::V:::EA:::Y:E:P::FD:T::ED:LGH:E
rrnAC0050       :::::::::::::::::::::HYD:G::H:::::::::::::D:::::N::::::S::::
Hmu1282         ::::::::::::H::::::::::::::VD:::::G:L::S:G::VD::H:RRG:::E:::

consensus       TVA--
#oth            1.111
Hut1452         ::G::
rrnAC0050       S::RL
Hmu1282         :::::