3 genomes BUD2574 3 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC1543 - - Hmu2393 Hut1687 - - -

Pairwise sequence scores
Consensus score	1141	Hut1687	rrnAC1543	Hmu2393
531	Hut1687	1229	246	267
682	rrnAC1543	246	1141	465
741	Hmu2393	267	465	1387

224 symbols
consensus       ----MMAEESQIIAAIEAAAEEIARAPDGSR----VIQIGRLLGA------------RIQ
#oth            11112121112222221122122212211.111111122122111111111111111212
Hut1687         MTDRP:TQS::V:G:VDNYSTTFR::VSR::LREF:VFV:M:F::GRRSSAACRLFRT::
rrnAC1543       ::::-:S:::GSLSP:::VG:K:SAIT::::::::::TTV:T::::::::::::::::MS
Hmu2393         :::::D:::RS:T:YL::::::V::L::::H::::T::::QS:TG::::::::::::W:T

consensus       RFLRESPCYRWLTKEPDPEVIVIDLRETYTVGPFIRLLDRLIPHVERAWN----GSVLKR
#oth            21211.22.....1...11.1....1..1.1..111.11111121122121111..1111
Hut1687         ::::H::I:::::S:::AD:::::::::V::::VL::VQP:---------::::::I:SQ
rrnAC1543       G:VQ::Y:::::::::::::::::::::::I::::A::::I:::::HT:QHSRV:::V::
Hmu2393         DVT:::SL::::::::::::M::::A:::::::::::::::::Y::::::::::::::::

consensus       TFARLAEAVRDGP------------------------------------------GGL--
#oth            222122121212111111111111111111111111111111111111111111111111
Hut1687         WYRGSRL:PG::::::::::::::::::::::::::::::::::::::::::::::::::
rrnAC1543       V:E::S:E:----::::::::::::::::::::::::::::::::::::::::::---::
Hmu2393         :T::T::L:::V:IKVASVLFIAVLLAQTIQLLPSIQNEPTTTLGIHAVAWLLAL:::RV

consensus       ---LDELANSRGARLARAVLEPPEPPDRDRKADDDPRERER---
#oth            1112221121.2222222111...11122222221122222111
Hut1687         :::TTTA::::T:QVLQT:F::::LS:GGD:::P:::::T::::
rrnAC1543       :::F:P::ET::YKF:VS::A:::::E:E:TTG:::GSN:DEPF
Hmu2393         DWT:E::SQ::VG::T::L::::::::D:------------:::