Home |  Text search
3 genomes BUD2580 3 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
- -

HVO_B0133

-

Hmu3182

Hut2329

- - -

Pairwise sequence scores
Consensus score3872 HVO_B0133 Hmu3182 Hut2329
1713HVO_B0133 3983 979 706
2634Hmu3182 979 3831 1617
2350Hut2329 706 1617 3921

557 symbols
consensus       -----RSRRRDLRRGARLARTELRAQIRRIAQNRRRLVGLAIGLLFFGGAFPLLFLEQAL
#oth            111112121211.212211.1.11222.222222.11..22221.2.12211.1122122
HVO_B0133       :::::M:L:::V:::L:IG:A:FVRS::GYTSET::V:::LLL::::::--S:::SLP:V
Hmu3182         :::::-M::S:::D::V:::::::::V::::G:::Q:::VVV:::S::LF:::T::S:V:
Hut2329         MTESS::SQQT::GAWT:::::::TTL:NVR:KP:::::F::IE:-:AV:::::VW::TT

consensus       AVARRAAQGAAPIARFGAIALAVAFVGGYLGAARAINQTRVGAV--GPLVRTSIPPAAVV
#oth            211222.212211221122221.2211212122222111.1.211111.11.111.21.1
HVO_B0133       Y::G:S::SVTE:PL::LV:T::PV:LTL:ATF:TLE--:I:R:EHES::L:TVH:R:::
Hmu3182         TF:EGL:S::P:L::::T:LVS:LT::V:F:::T:::::::::I::::::::::::EG::
Hut2329         ::G:E::T:P:::GILA:SY:::::A:::V:FVGGF::::::V::::::I:::::::::S

consensus       IGRFAAETARAAAGAVLPAAVLLVILGVGAGAPLLALLIGAAGVPLLCAGLVAGRAAGAA
#oth            ..112211222212212122.1112221.112.12211222221.112112.1.122.22
HVO_B0133       ::LIT::I::I:LWFG::I::VAATFTA:L:::S:L:TTTVVV:::A:CTT:W:Y:::V:
Hmu3182         :::::S::LQ:T:F::V:GV::::V:V::::T::P:::VL::SL:::V:::::::TI::T
Hut2329         ::::VTR:TEGL::L:PT:I:::::V::::SN::VPI:::LG:::M:G::V::::LL:DG

consensus       V-RYANRLLAVSAWGKAVVFVALAGGAFVGLQRAINALIGDGSI-GADSIAAILPGQPLQ
#oth            .1.122212211212111111211221.112121222121.1121121122.2.112.11
HVO_B0133       :L:GFK::PG:RRVL:V:G:::M:--:::LVSQ:FGR:L::::L:PV:TL::T:TFG::T
Hmu3182         ::::LGL:SRL::::::::L:V:::T::::::T::P:VM::D--:::P:VS:L:::::::
Hut2329         ::::::ER::::L:VR:G::LS:LI:I:A:T::LT:T::E::::V:P:::G:::::T:V:

consensus       AYAAL--VAAPLAARFRALGVALAAVIAAAIPLGLVAALRQESALLFDDRAPGGDRA---
#oth            1.11111.22.122222211..21112211211.11112.2111.1121.221..22111
HVO_B0133       D:L::AF:GT:::RP:S:AA::TF:A:::LT:::::V:T::A:::W:T::::::::GSAA
Hmu3182         :::SV:::::::G:TP:P::::V:::VL::V:V::A::::I:::::::::---::QS:::
Hut2329         ::::::::LS:VNG:VEL::::::G:LVM::S::F::VV:L:TL::V--:EV:::N::::

consensus       ---GDARAGGRSVPRLLAATNAGRIAWRYLLRTRRNPRQLAHLSMVLFGALGMAGTLIEQ
#oth            11111222122.1.12112.22111..11.1.11.2.2222..2111.12.122.12221
HVO_B0133       SAKA:ES:::F:T:KP::G::G:NV::GL:V:GV:H:Q:FT::V:LV:-F::PL::T:V:
Hmu3182         :::::Q:TTS:::::V::::P:T::::::::::::::KLVS::::::::::AF::S:VS:
Hut2329         ::::Q:TD:TH:::::FDL:QS:::::::::::::D::T::::TP::::V:::S::VF:D

consensus       PEALDDLGP---AAAVGAGAILAGATFCLNPLGDDREQLPLLLTSTASPRHLLRGRVLAG
#oth            1221221..111222121.22...11.1...2.1..1.1.1..11121212.1...111.
HVO_B0133       SS:-:G:::ILA:SGA:L:TY::::::G:::V::::P:F:M::LTATA::T:V:::::::
Hmu3182         ::L:M:::::::G:::V::SV::::::::::M::::::::::::::::T::::::::VG:
Hut2329         :HS:VLI:::::PGV:I:::::::GA:::::::S::::::::::::R:VGP:::::M:::

consensus       IVLGAPVAAGVGLPLGLIEDSPLRVLGRALLAVCLALAAAGTALGIGAALPKFERREYMN
#oth            211.22..2111112112221.1211.21.1212221.111111.2..12.11.11.112
HVO_B0133       VL:::::::ALP:VTVALGT:::SAV:F::VG::MC::::TFSV:::::Y:IY:E::FWG
Hmu3182         L:V:GT::L::::::::VS:P:::::::T::TPVVL:::::::::V::VV:::::S::::
Hut2329         ::::LV::-:::V:F::::Y::AF:::Q:::::L::V:GT:::::M:::::::::::::S

consensus       VERAHPSTLGTLAFLFGGGFVGAIGLVLLWLGVTGNQAAGPLLAGALGVYLAVLAAVAAG
#oth            11111..1121221211222122..1112.2111122221111212221.12.122122.
HVO_B0133       ATTVV::::VLM::M:VV:PGTV::::AT:F::::HL:PT::::AGV:L::L:TVG:SY:
Hmu3182         ::::::::::::TYF::TLV:VG:::A:V::S:D:G--G::::V::WI::::::::TGV:
Hut2329         :::::::FVI:FV::M::V::::::F::::V:L:E::L::---F:L:S::AV::SL::::

consensus       GYRYARRRFRALTIDDG
#oth            1.1..211112112.12
HVO_B0133       S::::I::Y:TY:F:--
Hmu3182         :::::VGK:DR:::::V
Hut2329         ::W:::::::::SL:::