3 genomes BUD2614 3 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC0286 HVO_2687 - - - hla1721 - -

Pairwise sequence scores
Consensus score	1855	rrnAC0286	HVO_2687	hla1721
1165	rrnAC0286	1857	601	805
986	HVO_2687	601	1249	826
1411	hla1721	805	826	1886

247 symbols
consensus       ---HPRDRISFSLSDDRPPSDTLAAGFSEFGLAGLTAVDYLARNHDLRQTGHLRAEELPF
#oth            111222122122222122121112212122111111111112222222221221222212
rrnAC0286       :::MSS:D::VV:::::::V::::V:V::Y::::::::::::DQ:SM:EV::::TS:P::
HVO_2687        :::---------------------------------------------------------
hla1721         MSE:::::P:::VTH:PT:::::V::::S::::::::::::V::L::E:::FV:::G::S

consensus       ITPFENGQPRHHIRLYSADALDITVLVGERFVPPVQGEQLAAAILDWTERAQVSEIAVLS
#oth            211122121112211122222221...1.2...112122112..12111222.11111.1
rrnAC0286       S::::::T::::T:::VDE:SSFA::::::::::A:AGS::G::ATAGRKLG::D:TM:T
HVO_2687        ----------------------V::::::L:::A:H:T:FGN:::E::::N::E:L::::
hla1721         ::::MK:::::P:::::::D:::::::A:Q:::::L::L::::::::::S:E::::::::

consensus       GVPIAHGPDAHRPFYIATDDYREARLADEDIPPMGRGFLDGTNAALVERGIDSPLGVGVF
#oth            .1.11....2.12..1..11.1121.2.2111..12..1..11.2.111..111.11..1
rrnAC0286       :::::::::D:V::::::PM:Q:SY:N:T::R:::N:::::LS:E::T::::ES:PT:::
HVO_2687        :I:M:::::E::V:::::::::D:::::S:::::::::F::::::::::::G:::::::Y
hla1721         ::::P:::::::T::V:::::::R::D::QV:::ES::::::::S:L:Q:::::::::::

consensus       ITPVHAQAPDAAAAIRLVDAANESYDLGVDSEPLESFAANVRAHYAALAERIDEAEAD-F
#oth            2..1.1.1..12..1..11122.211111.12..11...21221.22....221212.11
rrnAC0286       T::T:P:::::::::::LT:LK::HSIQI:TG:::N::::IE:::Q:::::M:A:DS:Q:
HVO_2687        V::::::V::VE:::::::::::V:::::::S:::::::E:QQY::E::::LH:S:::::
hla1721         :::::::::::D::V::::TID:T::::::::::A::::D::R::ED:::::E:R:P::G

consensus       ADDRMYM
#oth            22.....
rrnAC0286       :::::::
HVO_2687        PE:::::
hla1721         TY:::::