|
Pairwise sequence scores | |||||
---|---|---|---|---|---|
Consensus score | 4939 | VNG2358 | Hbo2816 | hla2627 | Hbo0573 |
3742 | VNG2358 | 5124 | 3338 | 673 | 1381 |
3868 | Hbo2816 | 3338 | 5109 | 822 | 1452 |
1246 | hla2627 | 673 | 822 | 5051 | 1077 |
2112 | Hbo0573 | 1381 | 1452 | 1077 | 4926 |
939 symbols consensus ----------RRPNGNQDNSAAIGRRRWLKALGATGVA-GLAGCSGNDSDGTATSGDSDA #oth 111111122232221222323322..22111.122.1.221...1.13222222123133 VNG2358 MANRDNHARPS:::TD:ST:E:HS:::V::::::::::A:V:::L:GG::DS:ATAT:E- Hbo2816 ::::::::::M:D:T::GGG:SF::::LI:Y:A:::::TS::::::G::S::::T:::T: hla2627 :::::::MLR:HTD:TD:::RH::::Q::S:::IA::::T:::::::EG::GDG:DG::G Hbo0573 ::::::::::-M:S::T:--KR:D::S::::::VG:A::::::::::QNQN:E:::KGGT consensus ETGSPAEDTTEAEDSSD------------------------------------------- #oth 221123312223322231111111111111111111111111111111111111111111 VNG2358 ::S::DTE:LQP:N---::::::::::::::::::::::::::::::::::::::::::: Hbo2816 TS::T:G::::QPS:DE::::::::::::::::::::::::::::::::::::::::::: hla2627 GN::DGS:GSDGS:G::GGNSVEVGNFPQFGVDDLYGEEVARNLARQAFEQSEYDYSFDG Hbo0573 ::SE:T:ES:::G:::G::::::::::::::::::::::::::::::::::::::::::: consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 VNG2358 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo2816 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla2627 GDLITPEGDQVEIDIYHSAGQETSQLTAEFIAQELGNNLGINVVVEAIDGTRFNNEYWTA Hbo0573 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 VNG2358 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo2816 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla2627 EPQGGTDTVNGEDVEWANPTPQNPGPQSVTSNEPWDMSIVFGLNTYPLNPLTNEVFFDGP Hbo0573 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ----IPAG---------------------------------------------------- #oth 1111213.1111111111111111111111111111111111111111111111111111 VNG2358 ::::::R::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo2816 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla2627 NSFYN:V:YYPEFDATGLFEEARQATSRDELRESFVEIFENLAQEQPYITLLFSDDLVGY Hbo0573 ::::RSI::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ----------------------------GTFKEATSATTNGLNALRNGDGNTTARIAAVM #oth 1111111111111111111111111111.112312112222..31232123122213321 VNG2358 ::::::::::::::::::::::::::::::::V::TS:::::::F:I:::Q:S::VNS:: Hbo2816 ::::::::::::::::::::::::::::::::K:VT:::::::VF:V:::E:::::EL:: hla2627 NPDLNGPIENFSNGWDLPAWHFNDPSVS:SYDTV:::GFTT::P:Y:TENGAGNA::RAL Hbo0573 ::::::::::::::::::::::::::::::YR::L::DAKS::F:FHS:T:::KFVD:T: consensus DQGFDR-GDEYDEILPLWFEDFTVEEDVKQIEITLRDNLQFGEPYGELTADDYLWNIQNL #oth .21131213223212.1121231122122211121.1..22122..21..1.21132211 VNG2358 :A::S:T:EA:ED:::::::::S:S:P:D::::::::::EY:NG::::::::::::LN:: Hbo2816 ::::I:L:P:::N::::::::V:::QP:N::::K::E::::::E:::::::::::C:D:I hla2627 :::YTF:-::NQ:YF::LYDMS:--::G:VWTFEV:E::::S::::QV::E:FVYL::E: Hbo0573 :YAY:F:-KDIG::V:M:V:SY:-:K:K:EWTF::::::RWSD:::D:::E:WVYTA::: consensus W----------KADWAAFAYSADF-VG---KPITFEKVDKYTIRETIPEPRP-FFPYNEP #oth 21111111111232.13222232121122222222.121122222.11322111222122 VNG2358 :::::::::::RP::T::T::HL:N::ADNT::::::::::::::::::::::::::::: Hbo2816 ::::::::::::::::S:::AN::Y::KED:::Q::::::::::::::SS:::::::::: hla2627 H::::::::::QSE::NT:A::SW:--:::DGVEV:QTGEFEFQA:LE----:--TA:LL Hbo0573 YGAKAPGESKT:EN::GVVQYS:W:--::::NL:I::AG:RKLKV:L:G:Q:A:IASTAF consensus LGGRY-----PIPKDLAKPYVEEEDADGLEQDEELMRAAFNGNLGPWDLKEWNRQSVMAF #oth 122321111111.12.111...22.21..11.112221311....121122.312.2232 VNG2358 :::M::::::::::A:::::::A:::::::::::V:::::::::::::::R:SQ:::::: Hbo2816 :SYQF:::::::::E::::::::Q::E:::K:DSI:::T:::::::::::N:KQ::::E: hla2627 WPET:DPLLY:::R::VE:::::::V:::::::::LELQ:T::::AFT:D::::G:GTQY Hbo0573 W:::C:::::-L::::V:G:::DK:IE::K:::::NSLSYT:::::Y:YE::Q:E:RFVA consensus ERADDYYLRDWAKRDDRVPDVFAEAPYFDEYHLQYFNEQSTARAALKAGEIDRAA-IPST #oth 1.111....321232212.121111.2.11222222312211131.23112132311.12 VNG2358 :::E:::::Q:::::::::E:M:N::::::F:M::::KA::::E:::G:::::VS::::: Hbo2816 :::E:::::K:::E::::::::::::F:::::::::DK:Q:::Q::Q:D:::T:Y::::: hla2627 T:N:E:::::INEG----::L:S:G:L:E:ASISVVE::ASRLG::ET::A:S:::::PE Hbo0573 T::::::::EV:GSEE-I:ER:::::::EK:E:KIIG:E::RL:S::E:DLTYFEDV::Q consensus KVESFRQDEGLKLYKNPYRPWSGYLGINQRANGWQ-----QLRNKEVRHAMAHAYSNDFI #oth 2222132322222212.2212222222.1.2...3111112112111.2.2121221321 VNG2358 D:PE::DQG:IE:::::::S::::::::H:::::T::::::::::K:::::::I:H:E:: Hbo2816 :IS:YK:K:::::::::::S::::::::::::::S::::::::::K:::::::I:N:::: hla2627 QF::YDE::NVTVR:I:-T:YNMIISV:::D::::SGPGNLFQIT:F:Q:V:A:V:KQQL Hbo0573 :::Q:Q:MDH::-FRF:PN:FCSMAYY:::S:::E:::::M:QR::::R:LST:I:KKA: consensus VENILRGRAEVQNTLQPAWGPYYPDDEVTFDG-----SLEKARRLLKEGTSN-DYGYSGD #oth 221112.213122.21.3.11221313222311111122221232211221312111211 VNG2358 :::::N:::G:::::H:T::::A:ENPT::S::::::::DE::::::::::::::::::: Hbo2816 :N:::K:::::::::H::::::S:::V:::::::::::::::KQ:::::::S:::::::: hla2627 IDGVY::L:STHF:W::R:SEF::G::-----:::::---------------:------- Hbo0573 A:::Y::FPT:AH:F::E:S:W:LT:K:EQF:VGDSYGS::::KMM::AL:DTN:::D:: consensus KFVGPDGEQVELTIVYQSGQQDDLRAA-YLKKRLGKVGIKLAQQTTSWPNLMQNYFNCTN #oth 221222121111231122233222221122122121211123232222222231223313 VNG2358 T::::::N::::::::::::T::::::::::::::::::::N:E::::::::S:::KT:E Hbo2816 :::::::::::::L::::DEL::::::::::::::::::::T:::::::S::K::::::: hla2627 ---------------------------:-------------------------------- Hbo0573 :L:DGN::::::SF::RA:S:NNQTV:EFF:QE:A:I:::V:PTNGGPF:TL::KYML:S consensus TADGFSD----G--------PS-YNAGP-DDAVSAQPWDFMLTLGFNYGPNTPAGTIANL #oth 223132322221111222221122131121312133211212222232213212221332 VNG2358 ::P:::GEPGY::::DENRQ::D::R::Q:E:::::::::::::::D:::::::S::T:: Hbo2816 P:E:V::AENL:YGENGKDH::I::H::W:K:::SKS:::::::::S:::L:::::::S: hla2627 -------::::-::::::::--:-----:------------------------------- Hbo0573 :S::TPS::::-::::::::--:F:::::-::T:QE:::L:YGVAL:AY:IN:D:S-RTF consensus FGEEGNFNAYGYAPDADLAAMRDAAQTAASRDAAKAAIAEMLAYLSEERPVIFEYNPYNK #oth 233223113111313322232213112132232223323222221121212212222223 VNG2358 ::T:QS::S::::::R::VG::::::::::::::::K:T:::E::::::::::::::::F Hbo2816 :S::::::::::T:GK:::::::E::::E::E::VGT:Q::::::::::::::::::::Y hla2627 ------------------------------------------------------------ Hbo0573 WVPD:G::F:::E:E:PM:DLY:T::S:TDEKTR:E:F:KIF:A::K:Q:TN:LNFSVY: consensus YAYRNNVEGM---PADGAFDY-LERWDSEMYFSDGASGR #oth 211332222211113333211232323232222223111 VNG2358 :::NDS::NI::::DSP:N::YV:ERY:::::::::::: Hbo2816 ::::::::::GQS:P:SH:::QTD::TAK::::::T::: hla2627 ----------:::--------:----------------- Hbo0573 N::DK:YM:::::::E:E::::::S:::TSWYLAKQ---