| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||
|---|---|---|---|---|---|
| Consensus score | 3291 | hla2623 | Hbo0577 | VNG2365 | Hbo2812 |
| 2239 | hla2623 | 3369 | 2029 | 1768 | 1786 |
| 2573 | Hbo0577 | 2029 | 3283 | 2037 | 2161 |
| 2607 | VNG2365 | 1768 | 2037 | 3332 | 2337 |
| 2601 | Hbo2812 | 1786 | 2161 | 2337 | 3348 |
462 symbols consensus -----------EDADEPLLEVRGLKKHYPITEGILKREVGRVRAVDGISFEIERGETLGL #oth 11222222222332212122.22......121.12211..211....1..2122...1.1 hla2623 :::::::::::-MT:::I:S::D::::::LRK::FN:Q::AAK:::::::D:AS:::::: Hbo0577 :::::::::::MSS:A::::::N::::::::K::M:::::S:::::::::AV:::::V:: VNG2365 ::MSKQIVNTES::A:S:MR:D:::::::::::V:RT::::::::::V:::VRA:::::I Hbo2812 MSFQSSDSSQR:K:E:T:V::S::::::::K:::::::::::K::::::::::::::V:: consensus VGESGCGKSTAAESVLRLEDPTAGEVLFDG---------------EDITEYDDTELKRFR #oth ..........1.2121..11..1.213.211111111111111112.1.212.21..1.. hla2623 ::::::::::::S::I:::E::::::V:N:NGRGGATRNPDGTHPN:V:KFS:A:::::: Hbo0577 ::::::::::::T:L:::::::D:::::E::::::::::::::::R:::::N:K:::::: VNG2365 ::::::::::V:::::::T:::::S:Y::::::::::::::::::::V:A::::A::::: Hbo2812 :::::::::::::AI::::E::D:TIT::D:::::::::::::::::::::::::::S:: consensus REAQMIFQNPDSSFDPRMSIGESVAEPLRIHGMGDRERRRAIARDLLERVGLSADDADRY #oth .1......1.2.......12.1111.1.31..121.21.12.13.......1113.31.. hla2623 :G::::::D:A:::::::TV:SA:::M:E::::S::H:::::VE::::::::::V:Y::: Hbo0577 ::::::::D:T:::::::::::::::::TV:::R::::::R:VK::::::::::::I::: VNG2365 ::::::::::::::::::TT::::::::K:::V:P:S::LE::::::::::M:GE::A:: Hbo2812 :::::::::::::::::::::::IT:::::::V:P::H:L:::S::::::::N:S:V::: consensus PHELSGGQKQRIALARALVLNPRLIVADEPVSALDVSIQAEILSLLKDIQAEFDLGMLFI #oth ...1.......11......1..2..1...........1...1.1.2211.2..2.12.1. hla2623 :::F::::::::::::::::::D::I:::::::::::::::::::ID:L::::::S:::: Hbo0577 :::F::::::::G:::::::::K::::::::::::::::::::::M:E::D::G::::L: VNG2365 :::::::::::V:::::::V:::::::::::::::::V:::V:T::N::::::N::V::: Hbo2812 :::::::::::V:::::::V:::::::::::::::::V:::V:T::::::T::::SI::: consensus SHDMSVVREICDRVAVMYLGEIVEIGRTEDLFEDPQHPYTRALLRSIPTPDPRSRGNDAE #oth ...11.1.11..1.......1...312.12212..1....1...11..121232113222 hla2623 ::::::I:R:::::::::::::::V:P:DEI:A:::::::E:::S:::::::::SVGGI: Hbo0577 :::L::::::::::::::::::::F::::::Y::::::::::::S:::Q:::TK:::AV: VNG2365 ::::G::::V::::::::::::::M:::::V:N::E:::::::::::::VGVE:::T::G Hbo2812 ::::::::::::T:::::::Q::::AD::T:::::::::::::::A:::I:AGT::I::A consensus LTGDVPSPSNPPSGCRFHTRCPEVIQPEGYDFEQEAWRGVMNLRVALERGGVDVEGLREF #oth .2.2..2.11..1..1.1...11.11.1.1.11.23..21111.11121111.1222.11 hla2623 :::T::::T::::::::::::HR::::::I:ID:SD:::IL:F:DRVAA:Q::::SI::N Hbo0577 :::::::::::::::::::::::::P::::::::::::S::D:::R:R:::::ADAV::: VNG2365 :R:E::P::D::T::N:::::::::::D::::::AH::::::::::V::H::::A:::A: Hbo2812 :S::::N::D::T::N:Y::::::V::::::::::N::A::D:::::::H:I:::::::: consensus VGVEAGASIEAADADAMKAELRREHDIPERLTDPSAESTLEEALDRIVRGDDEEARALLA #oth 122132313312132321111.1.1..113.2.221.21.221113122113221221.2 hla2623 IV::G:----::SDNDVREQ::K:F::G:::D::EI:D::R:VI::LLAR:::::AE::S Hbo0577 :AS:TSQ:P::VSE:RI:::I:::F::::Q:A:A::::V:SD::ELLAN::QS:::D::G VNG2365 ::::DD::VSP::::::::::::::::::T:::::::A:::A:::D:::::V:DG::V:: Hbo2812 ::LD::D::TPQ:VEK::::::::::::PS:::SA:::V::::::E::::NGAS:E:::: consensus DEFETVCEQATPELAEDAAGHPTACHR-HESEDTAAAPGTDD #oth 21.1.1.2332.2132323.1221.11123212231123211 hla2623 :R:S:P:AET:::RTVH:E::ES::L::::::HVV::SPI:G Hbo0577 ::::::::T:::::RRTPV::SAS::LIET::::LT::S:N: VNG2365 E:::::::GES:P:D::GT:R:::::::----:G:::R:G:: Hbo2812 R::::::G:SE:S:::S::::::S::L::SR:V:QTP:L:::