| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||
|---|---|---|---|---|
| Consensus score | 3510 | hla2167 | rrnAC0392 | Hbo2854 |
| 2390 | hla2167 | 3803 | 1596 | 1825 |
| 2481 | rrnAC0392 | 1596 | 3513 | 1945 |
| 2671 | Hbo2854 | 1825 | 1945 | 3509 |
504 symbols consensus --RLPSIGALERAFAVFTAVAVVLAVVLAGLAAATAAGGARDDLA-----FEPDV-PDTY #oth 1122.122221111.112.1211.211121222112.1212111.1111111.2.1.211 hla2167 MS::::::G:GS:R:::V:A::::::::::VV:::G::V:GS:A:GAGNGS::I:E:P:: rrnAC0392 ::MS:LSHDF::V:::G:::LL::S::AV:M:S:GE:D:T:::::::::::D:::::::G Hbo2854 ::-M::VS:-:::::L:-::V:L:GTT:SA:TVP::::-:D:S::::::::::G:::EE: consensus AFDAPTAAGTATV----------DGDIYDSAQAAVDAADPGDTVELRGRF--AETVIVRT #oth 2112.122....111111111111122.1121......21...1212.2.112.111121 hla2167 DP:R::D:::::ILRDGSDDTDA:PE:::DLS::::::G::::I::S:V:EP::::::DE rrnAC0392 S:TT:S:D:::::::::::::::::QT::::::::::::S::::T:D:::::N::LV::: Hbo2854 ::::::ET:::::::::::::::G::S:E:V:::::::T:::::HI::S:::S:R::IS: consensus PNITLRAAGGADALIDGDGDDDALAVRAPGVTVRRIWIRNSGRNTASNDAAIFV--NATD #oth .12.122122221111.1122121112.111..221.1211.221211..112.11.112 hla2167 :GM:I:::STH::::::G:E:TTI:::::NA::EGV::DDT:E:LE:Q:::VY:AE:::G rrnAC0392 ::V::SGS:S:ST:LH::::G:V:::E::::::SD::V::::YS::T:::::::::::SE Hbo2854 :::::ES:P:RL:R::::ETE:::TID:D:::::::::H::::D:G::::G:W::::G:: consensus ATIRDSRLTDATFGIWVNGVDDVEIANNTIVGREAIRQLARRGNGIQLWKTNDTRVRNNR #oth 2122.111..21..1.11.1.11212111.1.111212122.....11.1.211211112 hla2167 T:LT:LY::::A::V::::A:Q:T::DSR:E:TQ:P:-F:N:::::N::E::G:E:::TE rrnAC0392 V:V::::V::M:::::LD::::S::Q::::::::E:T::T:::::::I:::E:SVI:::D Hbo2854 :R:L::::::V::::::::::::LLR:::::::::V:P:SY::::::::::T::::VE:: consensus ITDVRDGLYYSWASNVNARANTMWDLRYGVHYMYSDDNRLADNTAFDNDVGYALMVSEHI #oth ..1....1.11..11.2.22....1............21.21.11.1........1.111 hla2167 :::::::I::::::::E:TG:::::::::::::::::::::::V::E:::::::::::S: rrnAC0392 ::T::::::FN::KD:::S::::::::::::::::::SH:R::::::::::::::::K:L Hbo2854 ::::::::::::::::T::E::::E::::::::::::C::QN::S::::::::::L:::: consensus EIVDNVAVNNRGQSGHGILLKRIDDSVVRGNHLVANDNGIFVYNSVRNRIAGNLVMANGV #oth 1211.1..1.2.2......1.2..1111.1.11.2.11.2111.112.2221..122.11 hla2167 :L:N:T::A:::E::::::::E::R::::D:T:::::::V:L::AQD:EVR:::LY:::: rrnAC0392 V:E:::::::S::::::::V:S:::TDI::::::D:E::L::::::S:::I::::VG:D: Hbo2854 :V::::::::T:V:::::::::::::::::::F:G::R::Y:L:::::VM:N::::E::I consensus GVHHAAGTEDERVAGNSFVRNDRQVLAVTRELVAWNASDRGNYWSRARAADIDNDGISDA #oth ...22..11122.21.1.12.112.111121112..2121.....2.221.2.2..21.2 hla2167 ::::S::::GTV::::G::T::E:::TT::::::::GT:::::::D::V::T:G::L::: rrnAC0392 :::I:::ST:GT:TE:::I::N:P::::MSDQ:H::E:-V:::::::NPT:V:D::VG:T Hbo2854 :::LT::::::::F:::::N:::S:F:::G::AV::::E::::::S:D:::::::::::V consensus RYRPAGAVERLIAEHPAAAVFADSPAFDAIRLAESSFPVVESPGVVDHRPLTEPPHDN-- #oth .11.1.2112122.1.1.1...1......1..1..11.111.1.11.11..12.1.2211 hla2167 :H:::::A:::VQ:::::::::::::::::::V::R::A:::A:II:::::AS:A::IEP rrnAC0392 ::Q:::T:QQVT::K:::R:::S::::::V::::::V:::Q::::::A::::::::E::: Hbo2854 ::::S:L::H::Y:::Q::::::::::::::::::::::I::::::::H:::T:::SD:: consensus WRRY---------YERN------- #oth 1.2.111111111.1121111111 hla2167 Y:P:AAAVDATAE:DDEPGDDHHQ rrnAC0392 ::S:::::::::::::D::::::: Hbo2854 ::::::::::::::::::::::::