|
Pairwise sequence scores | |||||
---|---|---|---|---|---|
Consensus score | 1638 | HVO_B0259 | hla2272 | Hbo3714 | HVO_D0001 |
1300 | HVO_B0259 | 1635 | 1081 | 339 | 156 |
1196 | hla2272 | 1081 | 2089 | 340 | 155 |
583 | Hbo3714 | 339 | 340 | 2938 | 254 |
252 | HVO_D0001 | 156 | 155 | 254 | 709 |
440 symbols consensus -------------------MSNDADGTDADDR---------------------------- #oth 111111111111111111112313322233212222111111111111111111111111 HVO_B0259 ::::::::::::::::::::A:::::::GT:-:::::::::::::::::::::::::::: hla2272 MKRVSRSVSIFCQKRSSNSRGV:RS::QP:G:NRPQPGEIRTARPETVRRISTVNPVAPG Hbo3714 :::::::::::::::::::::MTEPPE::G::DAQS:::::::::::::::::::::::: HVO_D0001 :::::::::::::::::::::L:---------:::::::::::::::::::::::::::: consensus -------------RLAAEADRPRGILTPADREFLLGRK--TDYTDQSAKQRRNRIRRRLR #oth 11111111111113223231.2....111..21.22111121112123221.21.11.12 HVO_B0259 :::::::::::::D::YA:::G::::::S::::::::::::::::H:K::K::::::::: hla2272 ISAMSQNDVPESLEA:::S:::::::::S::D:::::::::::::H:R::K:::::::V: Hbo3714 :::::::::::::::EE:L::::::::T::::Y:THPEGSL:L:E:T:RK::S:::E:VY HVO_D0001 :::::::::::::------E:A::::S::::RY:QKP:::-E:SK:AGYE::RA:VE::H consensus NAILDFDILFECLEERDRRTVFE--PDAADREAYTRGITDMLAFLHLG--TMGYETPFKD #oth 1.11.132.223.2112.321.21122332222223222222212211112212322122 HVO_B0259 ::::::T::::S::D:::E:::N:::::::::::::::::::::::::::::::Y::::: hla2272 ::::::S:::::::::::K:::D:::NDE::::::Q::::::::::::::::::H::::: Hbo3714 :::::::Y:-AK:P:DE::P:::KVR:GWVNGTSSVALRRLFK:VY::LKSV:L:RG:GN HVO_D0001 E:LH:MPL:VSE:D:DL:TEA::::-----------------------::---------- consensus MLAEGVNKAEQELA--GSDYRMVNVDFNVEPVGQIDVDEVEAKLERGEFAQLT------- #oth 213222321122211122222213131211222222222233221312233121111111 HVO_B0259 :::::::::::::::::::::::T::::::::::::::A:ID:::::A:D:::::::::: hla2272 ::S:::G::::Q::::::N::::::E::::::::::::::V::::N::::E::::::::: Hbo3714 V:ERAIED::K:F:RGHG:HVE:D:T:D::VESRTTSE:L:ERY:E::KLS:EEQSVLAR HVO_D0001 --------------::-------------------------------------::::::: consensus -----------------------------------------------------DEDLDAF #oth 11111111111111111111111111111111111111111111111111111.111222 HVO_B0259 :::::::::::::::::::::::::::::::::::::::::::::::::::::::E:Q:: hla2272 :::::::::::::::::::::::::::::::::::::::::::::::::::::::E:R:: Hbo3714 EKDYGLTDEMMMDSPYFDPDRENPGEAAFEAMMRDRAENLRAQDAPEEDIPEF:::M:LP HVO_D0001 ::::::::::::::::::::::::::::::::::::::::::::::::::::::G:::GK consensus ERLLAV----SDSFSATDARADIKARFDELYERITAAA--------DRRDRRLEELND-- #oth 112132111123222222333322332221213123331111111133322332223211 HVO_B0259 V::::E::::::D:::::L:::M::QMS:FV:::D::N::::::::E:::::VDD::::: hla2272 V:::TM:::::E:::PE::GEE::D:V::FA:KL:ES:::::::::TSHE:T::::TN:: Hbo3714 :HQRR:SPLIEG:MM::PIPQS:PMN::Q:::DLSKVLVWALRDDI:KT:IGF::FH:VQ HVO_D0001 :HT:N:::::------------LSWS:AL::LG::DTV::::::::------------:: consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 HVO_B0259 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla2272 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo3714 ELMPNPVIIQTYYENAGDEFAIDEDDQLKEFVTLWDAVLAAAGWERPEGFDGLLEAMDFT HVO_D0001 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus -------------------- #oth 11111111111111111111 HVO_B0259 :::::::::::::::::::: hla2272 :::::::::::::::::::: Hbo3714 PDKYDSERLDALLTELEGGR HVO_D0001 ::::::::::::::::::::