|
Pairwise sequence scores | ||||
---|---|---|---|---|
Consensus score | 5405 | hla1201 | HVO_1201 | Hbo0360 |
2859 | hla1201 | 5645 | 1509 | 1477 |
3384 | HVO_1201 | 1509 | 5308 | 2321 |
3473 | Hbo0360 | 1477 | 2321 | 5843 |
831 symbols consensus MHQMIAVF---PHAYALFVAGALAASVTIIVLRRRRRYARRVRRPFAGLTLSCAIWATAY #oth 12222212111.2222111.1212211122112121112111121.121111221.11.. hla1201 ::PVSM:WQPT:YTVP:L::ALASF:FAVYAV:N:S:GEIPLV:S:V:V:V:SGV:SL:: HVO_1201 -MTSVGQY::::::::::A::I::GV::LV::G:F:::S::::L:::L::::GS:::::: Hbo0360 :T::::::::::-----::::::C::::::::L:Y:F::::::I:::V:N:A:::::::: consensus GFQLLAMTLEAELLWARLAWVGAAAIPTAWLVFALVYAGDDAILSRRRIAALCIEPAVAA #oth 111122211212.1122.21111.22112.2..21..11222211212212.121.1112 hla1201 AA::S:T::::T:::N::V:::V::LTV::P::VF::VDWT:WIRP::::L::LV::T:V HVO_1201 ::LF:P::PS:::FY:Q:::A:::V:::V::::::::::E:QL::TQMLGF:AV:::::I Hbo0360 ::::MVPL:GEK:::FS:WQ:A::FT::L:F::T::::::ET:::::SV:::::::T:V: consensus AL-------GLLGV-GADPIFAGDPDRIDTNGADFLGMEHGPLLALLAHLLYAFAVALFG #oth 211111111.121111221212221212212122..21221.222122122.22112121 hla1201 G-::::::::IFV::::::::YTS:SLS::::--::V::YL:TP:::GFMT::Y::N::T HVO_1201 ::KLTNASH::::S:SLG:WR:MQ:::FGAP::::::-PF::V:V:V::VV:G:G::VT: Hbo0360 I::::::::::V::V:ISDL:V::FG::S:SSGV::S:T::::YNV--::::VS:LL:V: consensus FAVIGRAALARDGNHRRQAALLLAAGVIPLAAGAGQILGPF-PRF-DLTPVAIGASSGVV #oth 22.211221221122..1122.12.111.22122222211111.11121.122121.211 hla1201 :::L:Y:::::::VF::::::::::::A:MTV:VIG:W:LIG:::V:::::TFA:T::LL HVO_1201 VS::A:TY:KSSNI:::::GF:FV::::::::LG:EFFF:::-:I:NPV::S::V::V:: Hbo0360 SV:M::LLVRG:::Y::GTVV::S:AS::VF:F:M:L::::::::::V::I:L:L::I:: consensus LWALFRDRLFDITPIARDAVFSEMRDGIVVLDDAGRVVELNRAARRLFARPQSEAIGCGV #oth 11211122.1.21.1...1111111.12..1.121.1.11.21.22.122121121.221 hla1201 G:VV::Y::L:LS::::::::ANLS:::::V:::::::D:::P:::::P---:A:::::: HVO_1201 ::::::HQ:::::::::::IL:::::AV::::EQD:I::S:G::SE:L:::V::CV:ES: Hbo0360 :FG:RS:D:::V::V:::Y::::::::M:::::R:::::::P::LP::TV::E:I::SHI consensus AEACRRALAVQALLDAD----------------RDRLRATVEDDGDNRYLEVAAEPL--- #oth 2122222221211121111111111111111111111221.111122.121121211111 hla1201 D::FE::P::TD:VSR:GTVDGAGSRGTPGADPD:D::V::DGGS:P:F:T:::HSIAGG HVO_1201 L:SV:VPSE:::V:-:G:::::::::::::::::::AQ:V:::::T:::F::RS:::::: Hbo0360 :DI:HNS:GMY:::::::::::::::::::::::S::DI::::::EK::Y:AT:T::::: consensus GSGAGRD---------------RGRALVFRDVTERRRTEARFRALIENSRDIIAVLNADG #oth .1121211111111111111111122.111.1...1111221.1...1.112.2.122.. hla1201 :::::VESEFESPPEFGSTSAAG:TV:L:::::::ETLQR:Y:::::K:PN::::CGT:: HVO_1201 :D-QT::::::::::::::::::T:L:::Y:::::::::EE::::::::::V:T:::E:: Hbo0360 :::E:H::::::::::::::::::W:::L::T::::::::K::T:::::::L:S::D::: consensus NRTYASPSIERVLGHQRAELEGRPVIDLVHPDDRRRAARAFDCAVEGRDPQRAEFRHAHA #oth 221.2..12221..2222111.2112111.....222222.12211222121111.22.1 hla1201 LLR:V::::::L:::SP::I:::::::::::::::E:Q:::E::F:TGE::AIDH:I::: HVO_1201 E:::T:::MTE:::Y:TDA:V:E::L::::::::D:V:DC::EV:S:DP:V:::::VR:K Hbo0360 :H:::::ASKH:::IP:S::::SNSFKQI:::::EDIRSQ::-T::S::TI::::::K:: consensus DGNWRRFDTVAVNLLDDPAVGGVVINARDVTSRHRYEQRLRVLNRVLRHDLRNDMNVILG #oth 1.2..21111211.11.111111.1111...111.1....1....1.....1..1...1. hla1201 :::::Q:::RVER:FE:--TEE:::T:T:::EIR:S::::Q::::::::::K::T:::G: HVO_1201 N:T::::E::G:::::::::::::L:S::::::::::::::::::::::::::::::::: Hbo0360 ::S::VL:A:::::::::::::I::::::::::::::::::::::I:::::::::::::: consensus HADLLRNERDDAERRDHARTIDRKAESLVELGEQAREIDRTLHREDRARAPVEVSERIAA #oth 1.1..222221212211221.21.121.12.1111.1..21.112122121111212122 hla1201 Y:N::::-HV:E:GD:YLDI::::V:T:TH:SD::::::VA:::-:G:::EIDL::LVTR HVO_1201 :::::LD::IP::SK::::::K:::S::::::::T:H::T::T:GPSGLE::::V:::E: Hbo0360 :::::GEMT::PK::A:VK::QQ::K:::S:::R:::::::::G:::E:R::::TDV::E consensus QLEAIESSNPRAIVNRNLPDAAWVCADNLIESAIRNVIDNALEHNDRAIPRVGVAVDRSA #oth 211221112.212.2221.1221.2.121211.221121..11...121.2.112.2212 hla1201 LC:SL:::F:::T:TVST:G::V::::E:L:::V:::LE::VV:::GDQ:I:E::::PD- HVO_1201 ::DD:::DY:E:::H:::::KM::T::D:::::LKHL::::::::::V::E:::T:E::: Hbo0360 K:::MQE:::SLV::TH:::EQ::L:T:HVGT::T::V:::::::::::::::IS:SK:I consensus HGNDY-EIRVADNGPGIPAAELSVLEAGTETALQHASGLGLWLVQWIIARSNGRLEFEER #oth 2222111.111.....1.12.11111211..2.1.2........2..222.212111211 hla1201 -:EG::R:A::::::::::V:R::FSEAR::::E::::::::::H::VTE:G:E::IHT: HVO_1201 TS:::V:::I::::::V:D:::::::S::::P:::I::::::::::::D::::::R:T:N Hbo0360 :TDEV:::::V::::::::S::AA:::::::Q:::V::::::::K::L:G:HATI::::: consensus EPRGTAAIMRLRPAN---------------------------------DEAAEARDADAA #oth 111.122212122.2111111111111111111111111111111111212222122222 hla1201 ::T::LIT:W:PT:::::::::::::::::::::::::::::::::::G:::K::E:V:N HVO_1201 ::::SV::VG::S:-:::::::::::::::::::::::::::::::::------------ Hbo0360 SG::::VV::FQ::SPPERDEQDESAEDDTTAATADTIGTESERTHGT::TD:T::T:E: consensus DEAAADANGGSAS---------------------EEPETDPAR-------- #oth 111121221112111111111111111111111121211.12211111111 hla1201 G::::::EAA::::::::::::::::::::::::SD:SP:::P:::::::: HVO_1201 :R::SASD::TIT:::::::::::::::::::::G:S:::---:::::::: Hbo0360 ::RSP:G::::E:ERERKQHVYSTHIPDAEDNSD::T::::D:QETVSADD