Home |  Text search
3 genomes BUD2665 4 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC1762

rrnAC2056

- -

Hmu0456

-

hla0157

- -

Pairwise sequence scores
Consensus score2370 rrnAC1762 hla0157 rrnAC2056 Hmu0456
1501rrnAC1762 2409 1061 1150 1175
1576hla0157 1061 2426 1339 1210
1892rrnAC2056 1150 1339 2406 1581
1798Hmu0456 1175 1210 1581 2436

327 symbols
consensus       -MAKVVVSDDPMIDPETLAAVL-DAVD---TIETAALDDEEAVAEAAAGAAALVVDVNTP
#oth            1132.12.1211212222122.21.11112212123232221232.121.11111.22.1
rrnAC1762       MSY::::::TKVMHG::R:::::::::::A:V::I:AKEP::::R:VD::D::I::AG:Q
hla0157         ::::::L:AF:::::::YRE::DE:::EPVE::V:Q:GST:RLI::::::D:V:T:ID::
rrnAC2056       ::ER::A:::::::VDR:R:E::::--:::DVVV:ET:::D::RD::::::G::::::::
Hmu0456         ::SE:L::::::L::SA::DA:P::--:::::R:EP:P::H:IV:::RD:::::::::::

consensus       VTAEVLEALDALKIVARAGVGIDNIDVRAAAEAGVTVTNVPDYCTDEVATHTVALLLACL
#oth            .1111222113.22.2..11.31.11.3..1231.1.111.1.111..11.222.1.1.1
rrnAC1762       :::::I::A:S::V:G:::I:M:::A::::VA:::::V:::::SVE::S:::F::M::::
hla0157         ::D:A:GR::-:RA:V::A::V::V::G::::R:::::RA:::::::::I:S:S::::::
rrnAC2056       :::G::D:::D::::::::::::::::S:::DN::::::::E:::::::::::T:::D:V
Hmu0456         :P:G:F:Q:P::Q::::::::FE:V::E::::HD:V:::::E:::::::::GL::::D:V

consensus       RRIAAYDRAVADGEWAWEVGRPIRRVADSTLGLVSFGPIARRAAEQLRGFDLDVIAYDPY
#oth            .31321.1313211.3.1211.11.2322.1.1.1..11.1.312221...2.11....1
rrnAC1762       :::PTF::S:KR:::K:A::Q::::L:G::V:::A::KL:S:F:AK:::::I::::::::
hla0157         :SLK:::DH:V:DG:S::::::::::SA::V:F:::::::::::::IA:::A:LV::::F
rrnAC2056       :TLT::::D:R::G:G::RT::VH::R:Q:::::::::::::VRD:::::::::::::::
Hmu0456         :K::E::::T:A::::::D:::VH:FP:T:::::::::::::LR:RV:::::::::::::

consensus       VDAEEMADADVEKVALEELLARADHVSLHAPLTDETRGMIDADALAAMRDDAILVNTARG
#oth            12221.1221..213111.2311.2.111....11.2111.....211213121..12..
rrnAC1762       APEYR:G:LG::S:T::T::GDS:I::::::::::::::::::::DR:H:::L:::::::
hla0157         :E:D:::EYG:::ADFD::FD:::::GVY:::::A::::V::::::RLDESSVV::VS::
rrnAC2056       :::::::::::::::::T:YE:::Y::::::::G::AE:::::::::::EQ::::::G::
Hmu0456         ::P::::A::::G:SF::::::::::::::::::::E:L::::::G::::H::V::::::

consensus       GLVDEAALRDALEDGAIGAAGLDVLAEEPP-ADSPLVDLDNCIVTPHAAWYSEEARDDLN
#oth            111.12..31..2113111.....222...2312..221.22121..11...111.21.1
rrnAC1762       :::::T::Y:::IS:DL:G:::::RKP::::G::::H:::SVVCS::V::::::S:VE:T
hla0157         PV::AD::L::::SET:KG::::::::::::E:D::::R:DT:::::::::::A::::::
rrnAC2056       :::::::::T:::::M::::::::::::::T:EH:::G::::::::::::::::::::::
Hmu0456         ::I:::::T:::A:::::::::::SRR:::AD::::RA:::::L::::G:::V:::EE::

consensus       ATVAANVAAALAGETPPNRIDPDTDWL
#oth            321.31.211.3..1.2111..121.1
rrnAC1762       Q:::ED:IRV:R::Q:E:P:::E:G:F
hla0157         RSG:VD:::V:N::::DG:V:::A:::
rrnAC2056       :A:::::E:::::::::::::::::::
Hmu0456         E:::R::::::D:::::::::::L:::