|
Pairwise sequence scores | ||||
---|---|---|---|---|
Consensus score | 5581 | hla0793 | rrnAC1479 | Hmu1928 |
4111 | hla0793 | 6215 | 3102 | 3022 |
4181 | rrnAC1479 | 3102 | 5624 | 3115 |
4133 | Hmu1928 | 3022 | 3115 | 5573 |
792 symbols consensus MTADASRIGCLHDGARSDEQAAAADW-AARAGDAAERVALSDLAA--------------- #oth 111221.112.2112212..11.21.112211222111.211122111111111111111 hla0793 :::SP::V:I:T::DF:E::R:::::L:::D:I:I::::FD::::PISDASSESSTEVSA rrnAC1479 -M::S::::::YVD:CT::::T:Y:::CQE:V:G:::C:::SVEP::::::::::::::: Hmu1928 ::DT:V::AS::::G::V:::::DE:::ET::LDLTP::V:::VD::::::::::::::: consensus ----------------GDR-----PLAAFDALWWHRDEPIAER-ALADAAEALAAYVRAG #oth 11111111111111111111111121221.21...111122121211.21221211112. hla0793 ESSHPSPDESYPGLGV:::RSRTD::RR::::::::AA::::SDP::::::GIDR:LA:: rrnAC1479 ::::::::::::::::---:::::--TEY:V:::::::LFD:::::::-:P:::::::D: Hmu1928 ::::::::::::::::::::::::S:::::TC:::A:::PKLG:STT:LGGV:R:F::S: consensus GGLLLTLAALAAVNRLGIEEVAPDAVGEDEDGEPTGHLWRALYDDHPAHADLATLRHHTR #oth .1.1.1.2.121.22.1212.2..11.212211...2.1221.1...22121211.211. hla0793 :::::::R:M:S:D::SV:S:P::R::::SL:::::V:::S::A::::M:S:EG::::V: rrnAC1479 :T:::::S::P::EP::F:::::::T:WE:VP:::::::Q:::::::I:::YD:::V::: Hmu1928 :::V:S::::T:::D:::DP:T:::::P:P::G:::P:IKTA:::::LFEP:::R:PL:: consensus GAGTDAPLARYESILPERGEVLASTIRGDTDVPDQVTAVSWRLGDGD--------VVGLG #oth 12.122121..1111.11.11....211.11112211211.22.1.211111111.1.1. hla0793 ER::-V:TV:::RV::::::P::::L::::AI::E:::::::V:E::ERGGPGGA::::: rrnAC1479 :::VTI:Y::::::A:RS:D::::::::::::VK:MAIL::EP:::Q:::::::::L:I: Hmu1928 :-::::T::::D:::::::::::::VSA:H:::GL::V:G:S::::S::::::::::::: consensus AGVAFAAPGG--DHAQ-------------GNRDRLAAAALANLAADDAHP--ARPRNADD #oth 2212..212111.121111111111111112.12.2222.221.1.222.112..22212 hla0793 :P:L::D:P:ID:::HDLEVHDPDAPGLA:T::C:V:GC:RS::V::GT::::::TD::: rrnAC1479 SS::::Q:TH:::VC:::::::::::::::::ET:IEN:::F::::ER::LTG::K:V:T Hmu1928 D:LV:::E::::::D::::::::::::::--:::::R:V:T:-:::S:I:::E:::TGGE consensus IAALRDRIDDDPE-----RPQYHLTPPANWLNDPNGLIRWNGRYHVFYQYNPGGPFHNTI #oth 222..1.21.11211111..21.111..........112.1....1......1..1.1.. hla0793 MRR:::::::AG:DGPGG::K:::::::::::::::::::D::::::::::::::::::: rrnAC1479 FGQ::E:L::::S:::::::S::V::::::::::::::H::::::L::::::A::::::: Hmu1928 :::::::FE:::H::::::::F::ST::::::::::VVQ::::::::::::::::Y:D:: consensus HWGHAVSDDLVHWEDEPVALAPSPDGPDRDGCWSGCAVDDDGAPTLLYTGGRGRDQLPCL #oth ..........11.1.1....2..................11.21.11....1111....1 hla0793 :::::::::::T:R::::::S:::::::::::::::::::::T::::::::N:::::::: rrnAC1479 :::::::::::::::R::::T::::::::::::::::::NA:V::V::::::DKR::::I Hmu1928 ::::::::::L::::::::::::::::::::::::::::::::A::V::::::::::::: consensus ATADDPDLRAWEKAEDNPIIEAPPAEPDVLRTEDWRGEFRDHCVWRENETWHQLIGAGLA #oth ..11.11.12.1.221..1..21.11111.2..2.21.....1..1.211.11.1.2.12 hla0793 ::T::::::S:::Y:G::V::S:::DL:::E::H::A:::::N::::DGR::H:V:T::V rrnAC1479 :::A:D::T::D:DP::::::EL::::E:::::::E::::::::::::::::::::::IE Hmu1928 ::::::S::R::::T:::::::::T:::L:S::E:N:::::::::Q:G:::Y::::S::: consensus DGGGAALLYESADLREWEYRGPILAGDRDTA-GTVWECPELLDLGDRQLLHVSNYEDVVY #oth 1...11...1121.11.1.2..1.1.11.12111.........1.111...1.1..1... hla0793 :::::::::TGET:T::T:E::L:::GP:A-::A:::::::::::::R:::::D::N::: rrnAC1479 G::::::::::::::N:::Q:::::::::::::::::::::::F:::::::I:::::::: Hmu1928 ::::VV:::::P::::::::::::S:::::PQE::::::::::::EK::::::::::::: consensus FLGTFEDGEFDVDRRGKLDHGDFYAPQSLR---------TDDGRILTWGWLPEARDVSAQ #oth ...121111.2111112..1..1.....121111111111.11.2.....1......11. hla0793 ::::V:::::V::SE:V::::::::::::SDSNRGAEDE::TE:S::::::::::::D:: rrnAC1479 ::::Y::::::::::D::::::::::::MW::::::::::::::::::::::::::::G: Hmu1928 :::Q:DGAT:EPE:::T::R::Y::::::::::::::::A::::L:::::V::::::::: consensus WDAGWSGAMSLPRELSLADDGRLRQRPARELTELRGDR-ASRESVALDAGDQRRLDVDGR #oth .......11....111111..2.1....2.1.1..112121212.2.1211221.11211 hla0793 ::::::::L::::VIET:P::D::::::D:A:D::TE:L:DG:T:::APD:::::::S:A rrnAC1479 :::::::::::::::::::::G:C::::P::::::::N:T:YDV:R:::::TEQ:P:ES: Hmu1928 :::::::T:::::::::G:::::::::::::::::::C:E:::::T::D:ESI:::T::: consensus SFELAARIALDDAEAVEISVLETPDRAERTPIRYARDDELAVDRSASSRDPRATADAQHM #oth 11.122222.2..1...2111111122.1.11..21122121..12..1..1.12.2.21 hla0793 AI:IEIE:::::::::::::F:::::::H::::::::GT:SI::TP:::::::F::::S: rrnAC1479 ::::R:TVR:E::::::L::::S::GE:::::::SYES:I::::::::T::Q::G:T:T: Hmu1928 :::::T:LS:V::D:::VTL:G:ATEN:::TL::T:::V:E::::R::::::::S:S::V consensus AVRPYDEPLSLRVFVDGSVVEIFANERHCLTSRVYPTRDDATGVSLAAEGGRARIASLDA #oth 2.2...1..1....1.1..1.21..1..........111..1.1112111.1.2111121 hla0793 ::P:::::::::::L:R::I::Y::G:::::::::::::::V:::AR::::::E::::S: rrnAC1479 R:::::A::::::::::::::V::::::::::::::::E::::I::S::D:H:T:::::V Hmu1928 P:T::::::D:::::::::::L::::::::::::::AG::::::D::TV:::::LPTVE: consensus WELASAW----- #oth ...212111111 hla0793 :::GE:MPTDGD rrnAC1479 :::D:V:::::: Hmu1928 :::::I::::::