3 genomes BUD2668 3 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC0267 - - Hmu2703 - hla2428 - -

Pairwise sequence scores
Consensus score	912	hla2428	rrnAC0267	Hmu2703
565	hla2428	2322	449	426
752	rrnAC0267	449	903	603
720	Hmu2703	426	603	915

306 symbols
consensus       ------------------------------------------------------------
#oth            111111111111111111111111111111111111111111111111111111111111
hla2428         MLPIATTATENKSFGRTCADVSSETAVTNPISSRRRPSRAASIPLSLDISPDLVDDAVVF
rrnAC0267       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hmu2703         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       ------------------------------------------------------------
#oth            111111111111111111111111111111111111111111111111111111111111
hla2428         VVTCLRTERVDRLTDPHPCGEVQQCNERHQPELRVHSEPDEESQRERYRHDGVRDQRPSS
rrnAC0267       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hmu2703         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       ------------------------------------------------------------
#oth            111111111111111111111111111111111111111111111111111111111111
hla2428         EVVQQAENPCHMNNIGTNAYICSSERHHSPGHSPARRGSQTDRTASDTGRVIRSAITWHG
rrnAC0267       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hmu2703         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       MALNDTVRVEDVMSTPLETISANETVRAAARQMRASNINGLFVPGADAGIVTTTDIVDAV
#oth            122211111111.......1111111111.21.221111111.111211.1.11.1.2..
hla2428         :D:::RT::SE:::::::::G:::PL:E:::R:SD:D:SA:V:TTGGGC:::QS:::G::
rrnAC0267       ::TET:::I::I::::::::::D:::K:::T::Q:Q::::I:::::E:::I:::::::::
Hmu2703         -MSS:::L:::::::::::T:P:A::::V:E:::E::V:::::::::::::::::V:H::

consensus       AEGADLTETTVADVMTSPVERVTTDLELNEAAAMMTNYGIKHLPVIDDHQDYVGMVSSTD
#oth            .1.2.11111.2....11..1.1121112.1.....2111.....2.112..........
hla2428         :::E:T:::::R::::RN::T::P::MME:V:::::M::V:::::V::--::::::::::
rrnAC0267       :S:K::SSA::G::::::::::::S:::G:::::::T:D::::::::E::::::::::::
Hmu2703         :::::::::R::::::::::::E:TT:::::::::::F:::::::M:::G::::::::::

consensus       ITQALS
#oth            112211
hla2428         :AEH::
rrnAC0267       ::::::
Hmu2703         T:GEFA