3 genomes BUD2673 3 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC3061 - - Hmu2182 - hla2143 - -

Pairwise sequence scores
Consensus score	1028	rrnAC3061	Hmu2182	hla2143
771	rrnAC3061	1010	600	372
751	Hmu2182	600	1081	406
561	hla2143	372	406	937

152 symbols
consensus       MSDRSPIRRARDNATEIASLAVTGIWLAALLTGQEWWLPALLVGYAVIVPLTALLFGDDE
#oth            122221221112111222122...2.121.21111...11111..2.2..1112.11121
rrnAC3061       :T::::L:::::::::L:::::::F::V::V:::::::A::::::V:V::::E::Y::TD
Hmu2182         ::EET::D:::E:::G:V:ML:::::MIG:F::::::::::I:::::F:::::T::::E:
hla2143         --------------------V:::T::::::LDFG::::FM:F::I::::VV:M::DE::

consensus       ERAEDADRVEPAQS---------READAPNEI--PLERLRRRYANGELTDEQFERKLDRL
#oth            11212112121221111111111222121212111.11..1...2.1...1...1..1..
rrnAC3061       :E:A:::E::::L::::::::::--S::DD:T::::::::::::D:K::::::::::E::
Hmu2182         D:E:W::D:TGTV:GETTRDESE::::S:::::::::A::::::E:::::::::::::::
hla2143         ::V:KVK:ES:G:T:::::::::EVEEG:EQVQDA:D:::T:::::::::T:::Q:::::

consensus       LETETLEDAEEFAERARQER---ERDRERER-
#oth            .....1..21122112211.111..22.2111
rrnAC3061       ::::::::I:DS:AVRE::::::::Q::T::T
Hmu2182         ::::::::V::YR:::S::::::::EL:---:
hla2143         :::::P:::A::V::S:RH:PDS:::I:::::