| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||
|---|---|---|---|---|
| Consensus score | 9064 | HVO_2827 | hla0931 | Hmu3373 |
| 6849 | HVO_2827 | 9014 | 5777 | 2716 |
| 7260 | hla0931 | 5777 | 9488 | 2832 |
| 4030 | Hmu3373 | 2716 | 2832 | 8774 |
1244 symbols consensus ------MVSDDGADPDG---PIRLRGAQREIRDAYFACDAGLFTLDCVPGAGKSATAEHV #oth 11111121121122111111121.2...11...111.2.2...1.1.11.2...211211 HVO_2827 :::::::::EEE:T:::::::L::K::::::::E:::::::::::S::::S::::::T:I hla0931 MESRRET:::::G:G::DAD:::::::::::::::::S:S::::::::::::::VV:H:: Hmu3373 ::::::--VT::VP:--:::---:E:::DR::::FL:H:R:::V:::TA:F:::T:V:R: consensus AAEDLLRRYAAGDPTPERHVAVVSFNRDEAADIVPAICARLAAIVEHELVPTAADISEAE #oth ...111111121111..2112....1.11..2...11121.211111111.1.221.221 HVO_2827 :::::::::VD::::::L:::::::::::::S::::V:E::RV::::::::A:SEV::P: hla0931 ::::I::::::::::::Q::T:::::::::::::::::D::Q:::::D:::::::::G:: Hmu3373 :::A:VEAG:QA-AA:::GLC::::S:ED::G:::G:T:A:::FADD:Q-:::TT::PER consensus LRYLRQRVRRAPHAGTIDSLLREVFREIAADIGFEQMPSVGNDALLKRVHAACYDALRND #oth 111.21...2.122....111.2111.22212..12..1...1.1.11112211121121 HVO_2827 :K::L:::::::FI::::::::G:L::VVH:V:::T::::::E::::::::E:::RISD: hla0931 :::::::::Q::Y:::::G::::I:::F:R::::DE::::::::::::::RD::ES:::: Hmu3373 S:R:QE:::H:D:V:::::IF:T::T::H:EY::::::T:::::R:SSLRE:AL::::GR consensus PACARRLRRLEAAYPDGDADAG-------VDEMLERALRYCRDRRLSTEAFRDELERTRD #oth 12211.121.11..1112212.11111111111.12.1211.1...11.1..21.1211. HVO_2827 :::::::E:::::::S::H:::::::::::A:::::::::::::::T:::::V::::::: hla0931 :EH:::::D::::::::EY:E:::::::::::::AD::T:::::::::::::S:::Q::: Hmu3373 ESLTA:FD::DE::G:ET:SD:RGADGRTL:TL::T:RSAK:A::::D:Q:::R:LGAI: consensus AAYPDGRPDSFDDVVRSVERFANGD---SEAAGERARDSVIDPDRARILAADRALYDAWR #oth 21111.2.11.111.11.1.12211111211111.21121222.12122211111111.2 HVO_2827 :V:G::E::::E:::S::::-CL:::::Y:::::::::::S:V::G::VE::N:::H::G hla0931 S:::G:K::::::I:::::::::::ENA::GT:::V:ET::G:::E:L:D:::E:::::D Hmu3373 E:F:::::AT::A:::D:A::FDEE:::TA::FR:RH:-----:E:AVT:QS::CF:R:: consensus ARIEDFCELLSAYRTRYRAAVRERGVLSHQDVAYLVDAYFDRSGEADDL-------DRSH #oth ..1111.22111.112.1211..2.111.2..111.111.121.122.211111111212 HVO_2827 :::::L::T::T::ET::D::::F:::::I::S:::::::--G::FE:F:::::::::EL hla0931 :::D:::TV::::::::::::::Y:AV::T:::S:::::::::::RS::PEPLRSV:G:: Hmu3373 ::V:E::S:VV::E:E:DRRC::::::A::::::W:ADF::E::D:::-:::::::--:F consensus RDRVLRRYRSRIRSLVIDEAQDVSAAQHAALSHLVTDEARVLACGDGLQGIYLWRHADPA #oth .11.1221111111.11.......12..1..111.1212..121..21.1..1..1.1.2 HVO_2827 ::H::GK::::::::IV::::::::I::::::::::P:V:::G:::V::::::::::::S hla0931 ::::::T::::::::::::::::::V:::::::V::S:S::F:::::::::::::::::R Hmu3373 :E::RQ:HAHALQT::::::::::V:::D::AP::P:D::::LA::TD:C::A::D:R:: consensus LFAAATTEGTYLGRDWDPHENRTAATTYRCVPDIAAAVNAVAEPVFGDPARGNIGDLDAE #oth 1.22.111.1.1.21.12..111.11...11.1111111111.11.2.....12111112 HVO_2827 ::ES:::S:R:::I:::V::::::::::::::A::S:::T::::I::::::::::::::: hla0931 W::::::::::::V:::T::::::T:::::::::::GI::I:::::S::::::L:::::S Hmu3373 ::TR:FD::::F::S:T:::RAD::R:::MR::VS:::D::F:T::T:::::AVHRTGDG consensus YAPLEAARDAGEE---AAVHVSSFAGRGHPGTATWANPDGERGEANILATHISRGLADGT #oth .211111.122111112....1.1212.1..121.12111221..12.111111111.11 HVO_2827 :T:::::::EV:::::T:::::::T:V:::::S:::::::G::::::::::::::IS::: hla0931 :PR:D::::G::GGDG::::::::::I::::S:M::D::::L::::M::::::::::::: Hmu3373 :::V:TD:E:TS::::P::::A:YRA::S:::T::FEE----S::AP:SNYLHGA:::DG consensus FANRDGDPLGVTVLFRRRTRMRDYAAAFEAEGLRVRNASEALFDCPAVEAVLAVCEWLVD #oth .12211.11111...11211.2212.111.1..1.12.112..11.1.12122111..11 HVO_2827 ::DEN:::::I::::::KS::S::D:::::::::::::::N:::::::R::FD::D:::: hla0931 :C:D:::::::::::::G:::PE:E:::A:::::::T:TD:::::::::TA::A::::TA Hmu3373 ::G::A:G-P:E:::PT::N::SL::RL::K::S:AD:::L::ET:L::L:VG:V::::: consensus PASPERTRALLTESGLAAACDAG-----IFEAAAWRLDRVLDD-DEAALGEAQREILAAL #oth 121.11.12.211121222212111111111122121.111111122112121122.22. HVO_2827 S::::G::R:V:::::GLESLE::::::::::N::SV:::::SA::G::T:::::T:::: hla0931 :G::Q::SK:::::P:N::F::A:::::P::SRS:D:::::::::P::V::E::G::RG: Hmu3373 :FD:::::::FDGAVP:VT::D:STVRE:AA::DY:::EIGA::--DR:PARVETF:DD: consensus ARLRDRRDAFEADPAAEYVEDVVEALALRADPNGDVGDTDPAQRVANLDALVETIAQWEG #oth 21..1.2121222.1221.12.111...11..21211.21.2111.11.1....222.1. HVO_2827 R:::::::V::TF::RT:::E::G::::::::H::F::V::::::::A::::::::::A: hla0931 V:::::S:::GRL::S::::::I:::::::::::C::::::D::::::::::::LSE::: Hmu3373 :E::G:LARRT:::G:LV:AT:::T:::GT::FDQ:D:--:RRCL:V::T::::VES::: consensus DNRYSLSELADLAEPFREDPDAGPTRPSAADADYDVEFRTIHRAKGDQDDVVVIADPGFN #oth 1221.111.2112111.12.22..12.122111...2.1.1.1....11.1.12..1112 HVO_2827 :EHH::PD:L::V:::::E:::::::::SV::::::L:Q:V::::::::::::::::::: hla0931 ::S::P:::V::::::::::GV:::Q::::G:A::::::::::::::::::::V:::::D Hmu3373 TD::::::::GVLQRY:AS:SH::LV:VPD:S::::V:::::N::::EA:I:CL::LSRP consensus IWSHGPHARRFVAQGNIAGLAPPTNA-SVPDDIAIPPFDGGLYDVGDDWDRDAGLRWATA #oth 1121...122...1.2211....121111.2.2211.111.1121212121121.....1 HVO_2827 ::TQ::::Q:::::::::::::::D:::A:T:VT::::::::::PS:G:Q::V::::::: hla0931 :::::::::W:::::PL::::::::T:E:::::::::::::::G:::::::::::::::: Hmu3373 LGV::::RDS:::R:ETLA::::AT:P:::V:---E:SAH:VES:PR-------:::::N consensus RWRDT----------------------------ANDSADRDALVGPPRLRRLAANERAEA #oth ..1111111111111111111111111111111122211212.1..111111.211..12 HVO_2827 ::::::::::::::::::::::::::::::::::VPT::P:V:::::::::::E:::::S hla0931 :::::VSTSVSDSASDSAKDSGSDSAKDSGSDS:::::::::::::D::::V:G:::::: Hmu3373 ::VGD::::::::::::::::::::::::::::-----EQPR:G:::VFSE:::AH::DR consensus WRLLYVALTRARDHLVIPLPRDALEEGR-PRDRWLDAIRDGLAFPDGCTRGYELAALDSD #oth ..1....1...1...1211..2222211111.1.112..11.111112122121221211 HVO_2827 :::::::::::M:::M:::::T-FPG::::::::::S:::::R::::::ET:T::PIE:: hla0931 ::::::::::::::::V::::SN:::D::T::::::::::::::RR:G:DS:::L-:::: Hmu3373 ::T::::M::::::::LSV::::TSH:TP:Q:S:VTT::RA::L::SLE::RIDT::QRP consensus PNRDAIAIGVNDADLDARRARKARRTPRDEAAESPPRRDRLAPWVPRFVNPSTMYPLTED #oth 1122212..11.1112.11212222.1121212111121.12111...111..1...121 HVO_2827 ::SER:R::::::::L:::H::GSS::LP:V:VRA:IS::::::::::::::::::::K: hla0931 ::::::E::::::::F:::::P:P::G::::T:::::::::D::::::LS:::::::::: Hmu3373 TGEYPL:::CL:VAY::SVSQSS:P:::TAL:P::T:TG:----T:::::G::L:::ATG consensus LDRYALAHLLGEPLHTDTNAVADDLPLAFDRLGPDAVGTCAHDVLTELVARGVSERAIRD #oth 2.111....1.1...121121221...2.112..121.112.11..11.2.1.1111212 HVO_2827 K:::::::::::::::E::D::E::::V:E:M:::E::S:V:G::::::K:E:::::V:S hla0931 V:::::::::::::::T::E:SG::::R::::::E:::::L::A:::::::::D:::::T Hmu3373 ::EHW::::K:A:::S:RP:PD:G::::::AV:::DL::I::::::TA:D::::TATLE: consensus CGDEVRDAFDEAVNERCRDVGEAERDGLFAFF-ETVLDDFLDSDLWARIADAATVV-TER #oth 212111221.1112122221.22..2121111111.111.12111.2.1122111.12.1 HVO_2827 M::::::V:::V:H::EPGI:VD::::::::::SD::::::E::::::::E:E::::V:: hla0931 T:P:::T:::::::AIPEP::::::E:M::::::::::::::::::D::::P::::D::: Hmu3373 :AEPLAGRL:A:ID:Q:::::GR::QQVASYVR:::CPQ:ASTGV:E:LQSS:VY::-:E consensus PLDGLAEVGDHEIEIHGRADFVSRAPDGDRHVTDVKAALTDLTDETRRRYELQIAAYAFL #oth .1.112211.221.2112..11222.2.222.1.1.22.112121..1..1..2.1.12. HVO_2827 :V:::VSL::V:::V::E:::LTVS:S:EI:::::::S:::::E:::::::::V:::GY: hla0931 ::::::::::LGV:::::::::VEY:T:::F:::::I:::EPSS:::::::::::::::: Hmu3373 :::AVLP:A::T::TRNH::I:::::::TWY:D:I:LV:A:-::A::D::A::T:F::W: consensus ARRQEASDARVRRTVETFGAARETTAGSWPPDIVERRLARFADR #oth 2211211122.1111111.222111121111111111.211222 HVO_2827 FD:::::AEP::::::::::T:::VSS::S:S::::::SMLT:D hla0931 ::QSG:::V::H:::::::V:T::::T:::::::H:::Q::LG: Hmu3373 LE::-LD::T::GRITCV:ERVDS:::TA:V:DI:SW:::::--