3 genomes BUD2683 3 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - - - Hbo3563 Hmu0337 - hla0088 - -

Pairwise sequence scores
Consensus score	2977	Hmu0337	Hbo3563	hla0088
2259	Hmu0337	2957	1690	1740
2204	Hbo3563	1690	3121	1814
2353	hla0088	1740	1814	2983

436 symbols
consensus       -------QTLG-RLR-LARYDALVLTAAIWFLGKFVRYAFPPLFEALQASYGVSRAAVGA
#oth            11111112111111.1121112.11.121..11..1........12111...1.2121.2
Hmu0337         :::::::V::AT:::G:::F:::::::SL::I:::L::::::::GT:GE::::::TVL:T
Hbo3563         MPQSKHQ:SM::S::::M::AT:AV:::::::A:::::::::::::F:::::L:V:T::L
hla0088         :::::::M:::::I::--E::V::::SL:::::::::::::::::P::::::::N:::::

consensus       AFTGFMAVYALLQFPSGAIADRLGSVRVIAAGAAVAALGSLALVFDAPFAVLAGAMVLIG
#oth            111.1.2...11.....111..2.1.1..11.121.12.1.2.11.1.111111.1112.
Hmu0337         ::::::L:::AM::::::L:::::::::::::::L::T:A:V::V:::::::::::::M:
Hbo3563         VY::L:T::::::::::M:S::F:::Q::T::SI:::::::T::::::APLFVV:A::V:
hla0088         ::S:::::::::::::::::::V:A:::::L::V::GV:::::L::T:::::::::LV::

consensus       AGTGAHKTVAIRLLSRVYPDRTGRALGAFDTVGALGGVAAPAAVTLFLAAPPAAAGGISR
#oth            .....1...11.1..1...2....1..21..1.12...1.1.1.11122211212122.1
Hmu0337         :::::Y::::V::::G:::::::::::V::::::F:::::::::--------V:V::V:L
Hbo3563         :::::::::S::V::::::S::::V::I:::I:SY:::G:S:V:::::VV::I:RPL:::
hla0088         :::::::::::::::::::V::::::::H::::::::::::::::::V:::::L::FL::

consensus       LPGAPWRGVFLAAGIAAIALAAAFARRVPQRLAARADRNAT-QDADGRDPAVGDYLAQFR
#oth            .1.11..11.122.22212..11.121..21.2121.221112122.221212...22.2
Hmu0337         :T:::::T::::G:::T:V:::L:V:::::::SS:::DD::AT::T:DGV::::::TM::
Hbo3563         :::E:::::::L::LFG:L::::::WL::SQ:::TD:P::::::D:::::T:F:::R::S
hla0088         ::::D:::L:VVT:VI:L:::G:::L:::G::P:D:::GP-:-ERE:SE:GAS::::L:E

consensus       DRRFAAFVAVTIAFSFAYNGAVAFLPLYLSDAAALTTATANLLYSALFAVSIVQLVTGDA
#oth            121111.12...2.......1........122121111...1.1.1..1112..1.1.12
Hmu0337         EWQ::G::::::L:::::::T::::::::A:ET:::A::::::F::::V::L::::::E:
Hbo3563         :L::S::IL:::F:::::::::::::::::ET:DF::T:::I:::V:::L::::I::::I
hla0088         :::L::::I:::::::::::::::::::::Q::G:S::::::::::::::TF::::S::L

consensus       SDRFGRAPILVVTLAVAAAALVAVVVFA---AGAGPLVLGAAVVALGLGSHGFRPVRGVY
#oth            ...2.12.21.11.11.1.1..111111111221..11..21...111.1..1.....1.
Hmu0337         :::V:T::M::::::::T:G::::L::S::::TG:::A::G::::::::A::Y:::::A:
Hbo3563         :::T::L:::::::V::::::::L:::::::-S:::::::S:::::AV::::::::::::
hla0088         ::::::F:VM:AA::L::::::G::AL:RGET::::I::::L:::F::::::::::::::

consensus       LIEALPERIAGGGLGVVRTLLMGAGAVAPAIVGAIADVANFRIAFGLLAAALAGAAALAA
#oth            .2121..22.1.1.............11..11.221.121.12..11..11111.1211.
Hmu0337         :MAVV::DV:::S::::::::::::::::::::WLS:::::QV:::::::::I::TG:T:
Hbo3563         :V:I:::W::A::::::::::::::::S:::I:YV:::F::::::VV:::SM::::::::
hla0088         ::::::::L:::::::::::::::::L:::T::::::ASG::P::::::G:::L::VA::

consensus       GLWLFER---------
#oth            1.11211111111111
Hmu0337         A::::D::::::::::
Hbo3563         ::L:S::DTSTSVRGV
hla0088         :::AT:-:::::::::