Home |  Text search
3 genomes BUD2689 3 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC0428

- - -

Hut1230

hla2263

- -

Pairwise sequence scores
Consensus score3559 hla2263 rrnAC0428 Hut1230
2134hla2263 3482 1695 1705
2984rrnAC0428 1695 3553 2548
2917Hut1230 1705 2548 3565

457 symbols
consensus       MRNVLLVTIDSLRADHVGYHGYERNTTPNLDQYAADASTFLNAFAHVGGTRFSFPSILTG
#oth            .2211...1.........1...1.1...21.21.12211.21..1.111..1...1.111
hla2263         ::DIV:::V:::::::::W:::D:::::::::R::S:Q::TS::::ACS::P:::::M:S
rrnAC0428       :N::::::::::::::::::::::::::QI:T::EES:::::::S::::::::::G::S:
Hut1230         :DK:::::::::::::::::::::D:::V::G::::G:R:M:::::::::::::::::::

consensus       VTPLMYGGHERISEEQTLISEVFNDAGYRTGGFHSNLYISADFGYDRGWDEFFDSAPDDS
#oth            11111...1112.111.111.1121.111.1.1.....2.12......111.1..11.21
hla2263         SYA:E:::F::L:SKR:T:A:LLEE:E:E:A:::::::L:::::::::FSR::::KS:PG
rrnAC0428       :::M::::::::::::::::::::::::::::::::::V:GK::::::::::Y:::::E:
Hut1230         :::::::::HSV::::::V::::D:::F::::Y::::::::E::::::::::::::::::

consensus       TTAKLRRWAKTNLDNT-HLYGLLQQAYDFIESSAGINVGSYHAPAEEITDRAIQFADSSD
#oth            11111.211..1.121121111.1111112.111.111..1121.11...1112122122
hla2263         :L::::QEV::H::SDG::::F::::FNAT:KR:::EL::AYID::::::::LSW:S:TS
rrnAC0428       A:S:::K:::::::G::-:LS::RRG:::L:::Q::::::::V::D:::::::::IEE::
Hut1230         :::SF::::::::Q:::PI::::::::::::::::V::::::::::D:::KG:E:V::VG

consensus       SNEPAFLWVHYMDVHHPFLPPAEYQRRFRDEPVSDRDSIQLRRKMIEEPEAVTDEEHQTF
#oth            122.2.1.1........11..1.1.12...11.1.12111....21.1.111.11.21.1
hla2263         ::-:R::::::::::::YV::::H:::::::::T:::AV::::::L:S::EI::Q:FN:L
rrnAC0428       DET:T:V:A::::::::::::E::::K::::::::DE:::::::Y::::::::P::::::
Hut1230         :D:::::::::::::::::::::::QQ:::DV::::Q::K::::F::::D::::::L:::

consensus       IDLYDAEIRYNDAEVGRLIEAVQSEWGNDYVIAFTADHGDHFLEHGYFG-GARALDVKNH
#oth            .....1..111..111..2121211.12.112.1.....11..1..1.111.121.112.
hla2263         :::::S::A:V::Q:D::::TL:T::E::P:::::::::EE::D::G:SHS:TFH:EVI:
rrnAC0428       :::::::::F::::::::MD::K:T::D:::M:L:::::::::::::::::::L::::::
Hut1230         ::::::::::::::I:::L:H:E::::E::LL::::::::::::::::::::::::::T:

consensus       VPLLV-NGWDDTGEYDNLVGLMDLPCTLVDAAGLDIPNTFRGQSLRRLAFDDEWNRNEVI
#oth            ...1111.1111111.21...2.112..1.2.11.1.2122.11.12121111.2.2111
hla2263         :::::GT:EEE:::S:::::::::AP::A:K:DV:R:G:Y:::P:SQV--E:Q:::S:::
rrnAC0428       ::::I::::::::S::E::::T::::::::T:::::::NWF::::::::::G::D:::IL
Hut1230         :::F:::::::DA:::DM:::V:V:S:::::::::::D::H:H:::S:V:::::P:ED::

consensus       GGWRDGDGDNH-LAVRERNWKLIAREDDNDDELYDLTADPDEQRNVAEEHPDRERRLREQ
#oth            1112.2.12211121.122..1.211212111....11..2.12112211112221..12
hla2263         AE:T:T:T:DRRF:::TT:::Y:-::ENG:EQ::::::::::MNDL:T:TL:VLSD:::T
rrnAC0428       ::Y::S::YE:::RI::PE:::::H:::E:::::::::::E::V::I::::S::::::K:
Hut1230         :::F::::-::::C::::D::::E:PG::A::::::VS::G:::::FGD:::LTE::::K

consensus       LDDHRQLVRATEA-EDVERPDMDEDVKERLRRLGYDE
#oth            .11.11..121.211111111.1.1.11...1...2.
hla2263         :E::--::TLD:SR::LGDVE:::E:RQ:::D:::Q:
rrnAC0428       ::::::::::::::D::::::::::::::::::::::
Hut1230         ::R::::::S::D::S::::::N::::::::::::K: