| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||
|---|---|---|---|---|
| Consensus score | 5789 | hla0056 | HVO_1069 | Hut1252 |
| 3990 | hla0056 | 5869 | 3108 | 3193 |
| 4507 | HVO_1069 | 3108 | 5903 | 3801 |
| 4656 | Hut1252 | 3193 | 3801 | 5904 |
840 symbols consensus ----LQAPDQEVVLAVVALPFLAAALAPLVYRLLGERTAYFGAAVAAAAFGLIATQY--G #oth 1111222.2221112111...1..122.11..12...11.11.1..1221..22121111 hla0056 MRRS:M:::LPI:TTA:::::V::V:S::L::V:::::G:A::V::::S:::L::EV::N HVO_1069 ::::-VQ:TP:::::::F:::::::FT:V::::F:::::::A::::LVTL::VTDL:LA: Hut1252 ::::V:S:S:S:L:V:L::::::::V:::::::V:::V:::::::::L:::::G:::::: consensus AHGTVGAEWIPSLDVSLAFHVDGLALLIAFLASGIGVLIFTYSGGYMHGEPGQAKYYATL #oth 11.1.222.1.1.1111112...12..21111..1.1.111..11...1.1.2.11.11. hla0056 S::::::S:V:A:::GVQ:T:::WG::F:L::::::::V:V::AA:::::E:L:R:::A: HVO_1069 :::::PL::::::GI:::::::::::::::::::V::::L:::::::::::::::::::: Hut1252 :E:V:SIP::::::::::LY::::S::LG:VV::::I:::::::::::D:::K::F:T:: consensus LAFMGSMLGVALAADLVALFVFWELTSLSSFILIGHYTDDKASQYAARKAMIITVAGGLF #oth .1...11....1.2..111.1......11..1.....11122.1.1..11.21..2...1 hla0056 ::::::I::::::S:::FI:L:::::::C::V::::::::SE:R:S::M::VV::G:::C HVO_1069 :::::::::::::G::::::::::::::::::::::::GE:::::::::S:L:::S:::: Hut1252 :V:::A:::::F::::L::::::::::V:::::::::Q::PD:::::::::::::::::: consensus LLAGFLLLATAS--AGAIGGATFRLA---AMIENADAMRERLRASGLFVPVLALIAAGAA #oth 1.211.1.2211112112112.12121112111112.1.12.121..1..1.2.2221.. hla0056 ::::L:M::V:A::R::L::V::D:T::::::A:DE:::AS::E::::::A:G::V:A:: HVO_1069 M:V:::::VW::GQT:::E:T:YSIP:::VLV:H:::I::V:T::::L::::V:VGL::: Hut1252 ::IA::::H:V::::DVM:T::::::GEGS:::::G:::::::SA:::::::::L:V::: consensus AKSAQVPLHIWLPNAMEAPTPVSAFLHSATMVKAGVYLIGRFRPLLGS------GEWELI #oth 1......1.2......1................1...12..1...1211111112..2.2 hla0056 :::::::::F::::::V::::::::::::::::V:::FL::V::::M:::::::P::V:V HVO_1069 T::::::F:V::::::::::::::::::::::::::::V::::::FLPEDAAVL:::T:: Hut1252 ::::::::::::::::::::::::::::::::::::::::::::::::::::::T::::L consensus FAGLGLLTMTVGAMLAVAATDIKELLAYSTASHLGLIVAGFGFANKYGAEAGAFHILNHA #oth 1.2........1.1..12.1.1..............11.1..1222..1.1....1.... hla0056 V:T::::::::::L:::::::T::::::::::::::M::::::DIV::G::::::L:::: HVO_1069 ::V::::::::A:::::S:::::::::::::::::::I:A:::::S:::::::::::::: Hut1252 ::::::::::::::::IK:D::::::::::::::::::::::IQY:::::T::::::::: consensus LFKAALFLVAGIIAHEAGTRNLDRLGGLWRDLPVTAAIAVVAALSMAGIPPFNGFYSKEL #oth 1...1..1....1.....1.1112....112..1..111...1.1...2........... hla0056 ::::P::::::::::::::::::N::::::E:::::::T::::::::::::::::::::: HVO_1069 S::::::M:::::::::::::I::::::RKH:::::V:::::S:::::F::::::::::: Hut1252 ::::::::::::V:::::S:L:SE:::::::::I:::V::::::G:::L::::::::::: consensus LFEATYEAAEHAGGIAWLLPVVAVFGSVFTFLYSIKFLSLFFGDRPDALAHVHRPPAAML #oth ...1.121.111..21.12.1..111.11.11..1..11....111121211.1..2211 hla0056 :::::::V:HE:::::::Y:T::TLA::L:VV::V:::A::::E:RAPT:DI::::IGLV HVO_1069 :::S::Y::::M::V::IF::::::::::::::::::A::::::E::G:G:::::::::: Hut1252 :::::FH:::::::LW:::::::::::I:::::::::::::::::::::E:::S::LP:: consensus APPAILAALAGVISAAPNLAIDGIIGDAFDA---------VAAG--EAH-FEVGLPTELT #oth 2..11.1211211122121212122122212111111111112.11111112121..211 hla0056 G:::V::IA:V:V:V::Q::V:A:VQG:V:::::::::::T:T:::::Q:L::::::HFS HVO_1069 V:::::G::VLA:::Q:::F:E:L:::VYGS::::::::::VP::::::S:S:HF::::: Hut1252 :::V:::T:::::GLG---G:G:TL:MH::PLEDFVERVI::::VEDP:::GYY:::S:: consensus PAVAMSAVTIGVGAAAYPLYDRLAAAIRRGAAARGPVRPNWWYDNIVEGLDQTSVAVTER #oth .212..111121.22.1.211.1112121212222.111111..22.22122.1121122 hla0056 :P::::::AVLG:FS::::RG::::G::::VD:PI::::SG:::W::STAEV::ARFGSM HVO_1069 :Y:I::LI::V:::::F:F:::IHD::N--::L:::::A::::::F::::TT::::::PK Hut1252 ::AG:::::::::VV:::Y::::::VVD:L:SIK-:LS:::Y::GL:GW::::T:-:::: consensus IHTGLLRTYAGWGAAGGAALALGGYAAAGGPLPAISGIGVAAPIVIVLGVALVAALAVAI #oth 111.11...12.2221221..11.11...22112212121221112..1..21.12..22 hla0056 V:N::::::V::V::A:SL:::A:F:::::::-E:G::::PLAVAV:::::TL:GV:::T HVO_1069 :Q::::::::T::LF:FV:::::::::::VSM:GF:TLS:SI:::L::L::::::F::DV Hut1252 ::::RI::::S:LML:V::::V:::V:::IV:::L:S:TL:::::::::::V::::::T: consensus APSHVAGVLTLSILGFMVAIFYILANAPDLALTQLVVETLVLVIFLLVLNRLPAFYGDAR #oth .1...1.......1...1...1.1.2..........1...1.11.....21..1..1122 hla0056 :T:::S:::::::::::L:::F:F:S::::::::::::::I:L::::::Q:::S::SEI: HVO_1069 :::::::::::::V:::::::::::D:::::::::::::::::::::::D:::::::::P Hut1252 ::::::::::::::::::::::::::::::::::::I::::::L::::::K:::::::LK consensus RRQI-VRDAGISGAVGATVFLTVLLSTAAPPADP--IATYFLERAGVPAEHGQFLADWGG #oth 2121111.222.22..211.11..1112121221112211121111..2111222222.. hla0056 PLS::A::::V:IL:::MA:VA:::TIPS:D:::TSV:::YT:Q:-::G---------:: HVO_1069 D:LVS:::GLL:L:::G::::::::::D:S:DPL::LQEF:VA:::::::::P:F::Y:: Hut1252 ::::::T:TI:::V::V:::::::V::::T:GK::::Y::::::G:::T::::W:LE::: consensus GSNIVNVILVDFRAFDTMGEISVVAMAALAILTLIAMRTRGETQ---------------- #oth .1.1.........11..1..11..21.111.11112..1...111111111111111111 hla0056 :T:V:::::::::::::L::LL::TI::I:::V:VT::::::ASVTEGDEEPIPDGGDSP HVO_1069 :::::::::::::GI:::::::::V::S:::::::R:::::::::::::::::::::::: Hut1252 :::::::::::::::::::::::::::::S:I:M::::Q:::::::::::::::::::::