3 genomes BUD2711 3 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC1964 - Hbo2863 - - - NP3608A -

Pairwise sequence scores
Consensus score	1851	NP3608A	rrnAC1964	Hbo2863
1157	NP3608A	1918	984	1042
1618	rrnAC1964	984	1859	1480
1643	Hbo2863	1042	1480	1853

260 symbols
consensus       MTRAKT------DSVRATATSLAVLSGIEDLGGEATLAELADELELAKSTIYKHLNTLED
#oth            .11111111111.1.1..2..111.1..22.1.2.112..212.12....1....1..12
NP3608A         :::QRVHISMSD:R:Q:::::VRI:E::VE:D:::GVT::STH:S:::::V:::::::QT
rrnAC1964       ::::::::::::::::::Q:::::::::K::::S:::V::::S::P:::::::::V::::
Hbo2863         :KN:::::::::::::::E::::::::::T:::G::::::T::::F:::::::::::::K

consensus       EGLVVQRDNEYRIGLRCLEFGGIAQRYDGIYEVAKPEVRRMAVETGELANLMIEEQGYGI
#oth            2.1..2.121.1...12..1..2...1.....1.1..111..111.......1..2.1.1
NP3608A         T:V::::GDR:::::KT:::::Y:::H:::::T:R::IES::RKS:::::::F::G:R:V
rrnAC1964       :::::E::G:::::::W:::::M:::::::::::::::::::::::::::::::::::::
Hbo2863         G::::M:::::L:::::::L:::::::::::::::::::::::::::::::::::H::::

consensus       YIHTTSGDQAVALDTRLGKRVHLHATAIGKALLSSFDDERVAEIIDRHGLPAETDNTITD
#oth            .1..11..1..2...21.1.1...2.11...1.1111....21.1111...21.11....
NP3608A         :V::AR::D::D:::QT:R:::::::GL:::I:ATL:::::RT::::::::EV:PH::::
rrnAC1964       ::::::::::::::::::::I:::K::::::::::::::::::::ETR::::::::::::
Hbo2863         :::::::::::N:::S::::::::Q:::::::::::S::::E::L::::::G::::::::

consensus       REALFEELETIRAAGVAYDREERVNGTGCVGVPIDTGDRREAAISITAPINRIAAPERES
#oth            1.1..1..11..22.1.1.2..1.2.11.111.22.111.1......1.11.22111111
NP3608A         E:::::::AA::S:::::::::C:P:MA:IAR:LS:PGP:P::::::G:VS::T:D:T::
rrnAC1964       ::T::A::::::ER:::D:T::::D:::::::::::::::::::::::::::LQS:G:KA
Hbo2863         :::::::::::::E:I:::K:::::::::::::VE:::::::::::::::::M:::::::

consensus       EAIDTVQQAANVIEVNLAHE
#oth            12111.2.11....1..112
NP3608A         ::RQL:E:TG::::L::TE-
rrnAC1964       QL::::::::::::::::::
Hbo2863         :I::::K::::::::::::K