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3 genomes BUD2728 5 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC2457

rrnAC3356

- -

Hmu1776

- -

NP2326A

NP4512A

-

Pairwise sequence scores
Consensus score1716 NP4512A rrnAC3356 rrnAC2457 Hmu1776 NP2326A
748NP4512A 2109 484 377 274 380
917rrnAC3356 484 1809 377 328 406
817rrnAC2457 377 377 1835 416 446
800Hmu1776 274 328 416 1534 705
985NP2326A 380 406 446 705 1742

303 symbols
consensus       MALQIGQALADGIDRLASKTGAILAVVFIAYQL-------ALVAAINELFLGRLP-DAAA
#oth            121311323422342343331242222223231122122241332232123341232333
NP4512A         :S:D:::::RE:AS:TVE:N:LT::A::AGIA:LTTVLFQT:TVG:A:AM:DFVQ:ELS:
rrnAC3356       ::::::R:FQ::::E:L:ER::MF:G:::V:G:LSSVVWAS:SQ:FT::::::::S::QV
rrnAC2457       ::::::S::EEAGY::F:R:::::L:A:F----:::::::::M:SFQV::NSI:ATTYTR
Hmu1776         ------------------------M:LT::::::::::::VF:GS::TAVA:M::::T:Q
NP2326A         :::P:::TI::::E:A:T:::LV::::L::::::::::::P::::T:T::EAL::AE:::

consensus       E--AEIGL---------------------TLPLALDLPLAVAGVGILVL-LFGEALALVA
#oth            3332311311111111111111111111122.1232323331231321232233134211
NP4512A         :EMQ:A:MSEAEFEEMTAELEAAAEEFRD:A::::G::VGA:AG:L:::A:VH::AR:I:
rrnAC3356       NQA:MA:-:::::::::::::::::::::ST::::::::::T:::A:::LILN:::NI::
rrnAC2457       MGYG::AA:::::::::::::::::::::A:::TF:I::T:::A::A:TSVVSLY:TV:S
Hmu1776         Q::GQ:::::::::::::::::::::::::::ISTSVSGLL:V:S:---::::TYIL:::
NP2326A         ::::D::::::::::::::::::::::::::::SA:AAA:I:VL:Y---::::V:V:V::

consensus       ARAFARDSRE--SFPSNLFTRRIGRALLAAIVAGILVSIAVGIGLILLIIPGLFLAVLFA
#oth            4.31132322113313423121221121222211213231132.22222...122412.4
NP4512A         V:V::T::SD::EVT:D:V:DN:LL:T:NGFIG::V:WGLIIV::VFI::::II:::::Y
rrnAC3356       I::::S:D::::PI:D:V-G::L::TVVV::A::::TT:::::::::::::::VFGL::F
rrnAC2457       F:T:VPGA:::::::EGA:::NVPL::VNVF:G::VY:LL:F::S::FL:::I:AY:V:I
Hmu1776         T:LLV:::S:LS:L::E:::H:V::::::::::NV::::::TL:::A:V::::::S:S:T
NP2326A         :::L::PHAALST::PS:Y::::L::T:::L:::L:ATV:I:V:TL::V::::::L:S::

consensus       FVRQEIAVEDRGFVAALRRSWRLAKGNRLALFGLALIVGIAAGLVGGASSFVG--AISGP
#oth            .33331211.412241233.23222121222.3142111323322224223321132221
NP4512A         :L:::::LN:KN::Q:MAD:::IT::H:IEV:LIGF::VLVSR:EEIS:TA::::VV:T:
rrnAC3356       :::::::LN:S:VIESISN:VSVVTD:L::T:V::IVLVVLGFVL:::V::L-::P::L:
rrnAC2457       :MMPYVI::::N:::::KE:Y::T::D:::::::L::::A::AV:::IIG:I:SL:L:::
Hmu1776         ::FFA:G:::Q:P:D::::::D::T:::WR::::V:::::V::A:::L::L:-::T:A::
NP2326A         :YLVV:G:::E:PLSS:::::Q::S:::WR::A:I::::::V:::SSVV:IAA:::VT:S

consensus       --AGAVASIVIAGLLSIFGTAVIAVAYLQLRTADASAASATADTD-I-------------
#oth            2322232333242333322211323.1212234223423334432323332111111111
NP4512A         :::::::AAIVG:::AA:::::VTR::V:INDD:::D:DVDET::D:EDDPYDAALGPDD
rrnAC3356       PMVL:TV:T:FSSVV:V:SI::TT:::::-----:TGS:Y:Q::ES:GGL::::::::::
rrnAC2457       ::VSQLPT:::QP:A:LY:::I::::FE::::::GRPP::PSED:TTMTAL:::::::::
Hmu1776         :AI:QIVVLS:ISIIT:VNYGIL:D:FV::::EA::EPKIQ----:-:::::::::::::
NP2326A         MV:SE::::LV::F:G:V:YG::IE:::W::EN:DP::A:::SM-:-:::::::::::::

consensus       ---
#oth            111
NP4512A         LSR
rrnAC3356       :::
rrnAC2457       :::
Hmu1776         :::
NP2326A         :::