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3 genomes BUD2729 4 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC1495

- -

Hmu1967

- -

NP0090A

NP1912A

-

Pairwise sequence scores
Consensus score7650 NP1912A NP0090A rrnAC1495 Hmu1967
3697NP1912A 7606 2275 2287 2235
3836NP0090A 2275 7501 2373 2447
4981rrnAC1495 2287 2373 9797 3842
5186Hmu1967 2235 2447 3842 7758

1346 symbols
consensus       MDSALRCLGVRPADEDADEAGADAPVEVVAVATGAD----LAEAALDCVVCEAALGDDE-
#oth            132333323232233323132323222213232131111132332311112133213322
NP1912A         :::PVL:V:TTDVPLP:GTRV:ET:S:A:S:L::GE::::----:VR::::SVGS:PT:W
NP0090A         -----------------M:S:GGIRI:R:GRGSVDE::::Y:PY:-:::LL:EPG:---:
rrnAC1495       :SDMPNL:Y:C::G::::T:IP::::S:T::::VT:ALSE:::HGY:V::::QH:SGS:T
Hmu1967         -M::::V:H:::::WSGP:L:D:FA:T::HGTD:::::::FET:N:::A:V:::::::D:

consensus       GLDALAALRERAASLPVVLCTAAADGTVAAAATRAGVTEYVPRR-L--GAETLADRVRAV
#oth            121112121123321.21122232.11211311.3111...2232111221211..1212
NP1912A         AAE:VERV:NAD:TV:ILVVSE:T::DL:IDVG:::AD:::SQER:ETDG::V:::::::
NP0090A         ::E:::R:Q::--:V:T::YDRT::P:I::E:::Y::::::TD:A:::::::::::IADA
rrnAC1495       :::V:::I::QYDA::::::::EP::::::R:::LD:::::::-:-::SEVS:T:::YDI
Hmu1967         :I:::R::::::P:::::::::V:::::G:::::H::::::::D:-::::VRV:::::::

consensus       VA--------D--SD---AP----------------------------------------
#oth            231111111112211222112211111111111111111111111111111111111111
NP1912A         SE::::::::-::--:::--::::::::::::::::::::::::::::::::::::::::
NP0090A         AG::::::::-::--:::--::::::::::::::::::::::::::::::::::::::::
rrnAC1495       :TQGREPTGR:DG::PPA::DDRPTRLPPELADSFDAIAGSISDAVVTIDADSEVVYAND
Hmu1967         :::::::::::HT::DAS::ES::::::::::::::::::::::::::::::::::::::

consensus       ------------------------------------------------------------
#oth            111111111111111111111111111111111111111111111111111111111111
NP1912A         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP0090A         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
rrnAC1495       EAVELTGYDRKELVGDDFAKVIPEHLRSAHFEGLDRYLRTGNRNVDWDYLELPLVTAAGD
Hmu1967         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       ------------------------------------------------------------
#oth            111111111111111111111111111111111111111111111111111111111111
NP1912A         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP0090A         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
rrnAC1495       QLTVAVSFGDFERNGQWFCTGVLRDISDRKERERALEETNRRLDLALDGTDTGVYEWNLE
Hmu1967         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       ------------------------------------------------------------
#oth            111111111111111111111111111111111111111111111111111111111111
NP1912A         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP0090A         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
rrnAC1495       TDEMVWDEATAELFGTTPTAFEGTASAFYEYIHPDDRQSLEAAFERVSEKDERVDAEFRT
Hmu1967         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       -----------------------RGAAAAADIEEREQRR--L-A-N-ALQRLATLAADND
#oth            11111111111111111111122133.3312132.1113221212121.13.12213223
NP1912A         :::::::::::::::::::::::-:D:RP:N::L:::AV::-:-:-:::E:::GII::RS
NP0090A         :::::::::::::::::::::::-IT:LD::-G:::E:-::-:-:-::::Q:T:A:G:AT
rrnAC1495       DVDGETRWLRTRGVIEERDAQAP:LV:I:T::TA:KE:ERT:R:N:DS::E:TQ::TG:G
Hmu1967         :::::::::::::::::::::TG:S:::S:G:S::::::HA:T:T:E::ES:::::SR::

consensus       LSQAEKVRRVLEIGRERLGLAFGYLSRIDDGTCRIQAAAGREDLVEAG-------TSAPL
#oth            1133.21122112.22..1232.1111111223323333.332122211111111212..
NP1912A         R:FE:::GD:::L:C:::::GI::::E::GDRFSFTQSR:L:A:L::AGTDHLLSE:V::
NP0090A         ::SS:::::I:KA::::::VS::F::EV:::::TVV::D:DP:G:TP:::::::::::::
rrnAC1495       ::E::T:G::I:::LD::DM::::::::E::VHE::TVT:NTP:-:S:::::::::ET::
Hmu1967         :E:T:RI:QA:::::Q::::PL::FT:::GS:Q::EVT:::S:::S:::::::::M::::

consensus       EDTYCRRTVDSGDLRAIA-DAEQEGWED--ARAYRSFGV-CYLGGEVVVDGEIYGTLCFA
#oth            23.1.11122221132211121322131222332321.121.2.1312.21231...1.1
NP1912A         :T:::::V:::::VSGF:VGV:GTP:::TLI:DDID::-:T::::P:::::D:E::::::
NP0090A         :S:F::Q::RTRGV::LR::I:SDV:T:GM:PN:::::-:::I:V::H:GDRS::::W::
rrnAC1495       A::::Q:VL:::::Y::::::TT::GHA:::DV:QQS::A::A::LIT:A::P::::::G
Hmu1967         SK::::::IQQDG:LT::::::::::S:::DS:FE::::S:::::T::::::T::::::G

consensus       DTEARSESFSDAERTFVRLLVEWVGHEIERRHRENELQ----RYENIIEAVDDGVFALDD
#oth            1221.222.111.32113111..122.3..221231.22222.212222112.111.1.2
NP1912A         :G:P::TE:::::Q:::EVA::::SQ:F:::TYW::::ETTT:L:RTFDRIS:A:::::E
NP0090A         :::::-:P:TQS::::::::A::L:::V::D::TV:::QAQE:T::VLKR:G::F::V::
rrnAC1495       :EQ::::::::S:EA:MK::::::N::L::::::D::E:::::::::::::::::Y:::S
Hmu1967         A:DP:DR::T:::KRL:N:::::::N::::NQ::TD:R::::::AD:::::::::Y::::

consensus       EGRFTYVNQAAEDLLDYDADELLGKNTWRIKND-L-----GQYERAQSIQEEMTFEDRDD
#oth            2131122.32112.112221111.13223223121222221312..31132222111131
NP1912A         NWS:::L:GQ::T:::RE::::V:::V:EEFSEA:GQQYEHE:R::MET::PV::::YYE
NP0090A         DWEL::I:PR::A:::G::::W:::SL:SVLPEE:VTELR::::::L:TG:AT:::V:PE
rrnAC1495       ::Y:EF::::MT::TG:SEE::::SY:GF:::::-::::::VV:::E::VQ::I::::::
Hmu1967         :::::L::E:MT::TG::RET:::SH:A:::D::-::::::TVD:::::LV::LRGV:S:

consensus       EETLELEIQ-A-GSAFPAQDGLTVLFDD---FAGTAGVIRDITAQKRRDQALRGLLETTR
#oth            2121111212121221.22.11122211221111111111.1131111112131..2121
NP1912A         PLD:WT:V-:-:-N:Y:SE:::S:F:--:::--------::::K::::E:V:::::::S:
NP0090A         SLG:W::M-:-:-:VY:DD:::::Y:--:::--------K::SGR::YE:SVGE::SAGE
rrnAC1495       :::F::S::Q:S:GS:::::HM:L:Y::DER::::::::::::E:::::E::S:::D:::
Hmu1967         :::F::S::R:D::::::::HM:I:R::GS:::::::::::V:::RA::E::E:::::::

consensus       SLMAAQSPQEIAEIVAEAARDILGFDRSLVRLYDDGDDTLRPAAASDAVP----DRPTYA
#oth            2.222112321111122.13321111312.1111221111321.2233222221121223
NP1912A         A:FRTE:QEA:::T:VD:TE:::DI:I:G:H:::::TG::QS::::T::FELVGEP:::E
NP0090A         K:H:SE:AGG:TD:A::::TQ:P:::::I::V-P:::GLAID::EGCSN::::::CG:V:
rrnAC1495       :::Q::T:::V::T:I::T:SD::::H:::::::EET::::::::::K:::::::::V:N
Hmu1967         ::::::T:T:V:::::G::SET:::ELN::::::SD::::V:I:RAGDSADEI::::IRD

consensus       ADEGLPGEAFERGEPLVDDDINRRDGYDSGPAASAIALPLGDHGVCSVGSQQGRAFDESD
#oth            31..32.21112.2211311332322111233322212.1.21..32.12331311221.
NP1912A         VG:::I:SV::S:::KTY:::E:I:A::Y:SVR::::V:M:::::L::::ETPG:::G::
NP0090A         IG::VA:Q:Y:::-A:::G:SSCLP:DE:------L:A:::K:::IV::C--:S:TG:T:
rrnAC1495       ::::F::::::::D:::I:EFD:V:N:::DVLSATMY::M:::::V:::A:::HE:T:::
Hmu1967         S:::Y:::::ST::T::V::L:D:A:::::::::::Y::::EY:::T:A:TEP::::D::

consensus       RSVAEILASNAAAALDRVDRERQLLRYETVVENVEDMIYVLDEEGRIQLVTQPLAEWLGY
#oth            212321..11111.11.22.123.21.1222.2121.3112122111211.2...221.1
NP1912A         E::V:L::TT:::::::AA:LST:KT::::L:ST:::::LA:AD:::TYL:A::::::::
NP0090A         :RLLSL::::VES::E:T::::::R::KAIH:T::Q:VF:VS:GTQ:D:::::::DRF::
rrnAC1495       V::GK:::::::::F:::E:::S:::::S:::::R::M::::D:::F::::E::::::::
Hmu1967         ::I:::::::::::FE:::::QE::::::A::::N::L::::::::F::::::::TY::F

consensus       DREELLGARPTIVLDDATIDRFEAAIGRL-RAGDAGAVDIETTLETADGEDRPAEIEVSL
#oth            1.22.1.332221211222232333223112313313232112131.2.23111.11211
NP1912A         :::D:V:ESV:S:FP::KPTG--------:E:ATD:QRT::A:AH::G:DP:L::VT:AP
NP0090A         :::::V:SEL:ALA::E:VELGFE:YE::::N:EE:P:V:::::PA::::TV:V:::Y::
rrnAC1495       E:AT:::QH:R::::QDA::E:TCR::D:CQQ:GT:::QL::A::::H::Q:::::::::
Hmu1967         ::S:::::::E:::::::::::::E::S:::R:::DHA:VQ:E:S::::N:::V:::I::

consensus       ISAN-AFRGTVGVVRDRTELAQTRAELEDERDRFSYLFNALPDAVVETEIVDGEPVVRSA
#oth            12332313.2.11.1.21..211111.22.11..22..231..1.11113122.211121
NP1912A         LENG:---:V:AS:D:IR:::A:K:::ST:::::AE::ERI::P:::AT:D:E:VRIEGV
NP0090A         L:S:SE:D:L::::::::::::::::::::::::QH:::Q::::::D::F:E::::::D:
rrnAC1495       :D:D:Q::::::::::L:::K:A::::::::::::::::T:::::I:::T:AD:S::::V
Hmu1967         ::GEG::Q::::::::::::Q:::ER:HQ:QT::::::D::::P:::::L::::::::::

consensus       NPAFEETFGYGASSLVGRPLDDLIRVPDAREETAPQLRDAAADDDRAQAELRRRTADGFR
#oth            .2..221.122322221322222112.2332223221323321223313.2.13.22.2.
NP1912A         :S:::SV:::ES::V::QKAG:V:-::ES:A:::DE::EMLKS:GV:TR:I::::VS:P:
NP0090A         :A:::::::VD:EQ:R:D:::EH:-::PGH::GTK::N:D:LSV::HT::V::E::::Q:
rrnAC1495       ::::SDV::::QDTA:DS::S::L:L:::TNDEL::FD:GQ::G:PF:T:::LM:ET:::
Hmu1967         ::::A:::DL:D:::S::TI:S:L:G::DS:S:D:S:S-:V:::ESV:G::::W::::::

consensus       DFLFRGVPYQRGD-TDRGFGIYTDITEQRERERRLRVLNRVLRHNLRNDLTVILGMADAL
#oth            2....112.222322322.........12.11.1.2111.1.......111112.3.13.
NP1912A         Q:::::FV::T:E:::HV::::::::::N::::Y:::T::I:::::::::N:VR:F:EL:
NP0090A         T::::::A:EVES::T:::::::::::RL:Q:::::::H:::::::::EM:A:V:Y::M:
rrnAC1495       :::::::::S:DGDSV:::::::::::::::::::KL:::::::::::::::V:::::::
Hmu1967         :::::A:::::::GRQFA:::::::::::::Q:::E:::::::::::::M:::::T:EE:

consensus       AARLDDEEHRDYAERIQRKAEEVVSLSERAREIEAAVRRDVQAGTDPVAVAAIVEDIVEQ
#oth            3312.12111321211312.21221.2221222232121113322321323331221223
NP1912A         ::E:::P::V::::::FET:D:L:::AAD:N:LRNV:G:N:GP:LEEA:L:PF::RVS::
NP0090A         RDE::GV:::G:::Q:Y:Q:N::SK:G:QVKR:QQ:L--::ERRRV::DPERL:D::A:W
rrnAC1495       DE:I:::N::SILH:L::::::MA:::::::DM:RS::::-:F::G::E:S:TIT:::SS
Hmu1967         VG:A::::N:TLLR:LL::::G:::::D::::::::::::-P:T::S:S:PE:::SV:DE

consensus       LRDEHPAATIRTAADPTPPAVADERLRTALDELVENALEHNGDEPSVRVDVQ-VDDEAV-
#oth            2222113121323312222322.31131213221..121.2222.1.2.21322122311
NP1912A         :KARY:S:::DRSVP:AET::V:S:FE:V:EHVI:::IV::::::::::T:GET::T::T
NP0090A         Y:::Y:T:S:SV:::S:V:V::::L:K::V:N:::::V::HPG::T:D:ELEA:G::WF:
rrnAC1495       H::K:-:GK:E:HLPE::VTAG:G::HRI:G:::::S:::G::D:::::::::::RQT::
Hmu1967         :AT:::E::L::DC::V::-I::P::::::Y:T::::::::-EV:T:S:::T:A:A:S::

consensus       RITIADDGPGIPERELAVITGDREITQLRHGTGLGLWLARWVIEAYGGEVDFG-DNDGGT
#oth            31213...1...23122111.121....3.21.1...122.22131..122.123332.1
NP1912A         ELW:D::::::::TARKI:::E::::::E:T::I:::V:::::::::::L:::TSDL:::
NP0090A         D::VR::::::::::Q:::S:E::::::D:SM:::::V:::IVDGI:::FV::::CED::
rrnAC1495       S::V::::::::QH::D:V:::EP::::::::::::::VV::A:T:::T::::SGS:::A
Hmu1967         ::R:E:::S:::AD::::V:::A:::::T:::::::::IT:L::S:::T:T:-:E:TA::

consensus       RVTLRLPRADRE--------------
#oth            3.1.1113321121111111111111
NP1912A         ::V::::SNA::D:::::::::::::
NP0090A         E:::::QQ:TV:TDVRAEPTADEPPT
rrnAC1495       V:::K:::I:V-::::::::::::::
Hmu1967         T::::V:HT::-::::::::::::::