Home |  Text search
3 genomes BUD2731 4 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC0608

- -

Hmu0173

Hmu2138

- -

NP1364A

-

Pairwise sequence scores
Consensus score1461 NP1364A rrnAC0608 Hmu0173 Hmu2138
462NP1364A 1377 219 271 290
920rrnAC0608 219 1426 610 753
929Hmu0173 271 610 1469 836
1136Hmu2138 290 753 836 1460

197 symbols
consensus       -MDKLKQIRRMKADLNNPHESEAIRAAARVLAEIEAAQRAAVQDQRAALGIDPDDDRTPL
#oth            1.321223232133.31.221131113.211.11.332.212322213112113222221
NP1364A         ::GP:E-------S:TD:A:N::V::V:AAF:GM:RDF:::I:AHY:::::::PP::P:-
rrnAC0608       M:::::::Q:A::E:E::R::DH::VI:E::::::T:::R::ME:::E:ELETG:G::N:
Hmu0173         ::Q::NEM:E::KQ:D:::D::K::::::::::M:NRP:ESYI:VMETA:ME:ET:--::
Hmu2138         ::ERM::L:Q::G:::D::N::R:T:H:::::::::Q:::::L:::ER:::::::SV:D:

consensus       DAEERVDELCDVIAARTPGGPSLAEIWLSRCAPDDIDA-DDPAALATYAEMDRGEWEAQI
#oth            1311.1221111121321.1112213.223.2221213131.231321121232..2212
NP1364A         -::::I:Q::LLVSHHFR:-----DL:GYF::EQAP::LER:DDARAF:GQSDA::::SM
rrnAC0608       :KQ:::GAIL::VD:Q:::::::::T:IEQ:V--:::-:G:::::SH:SA::SD::A:::
Hmu0173         :I:S:::::::::::KV:::::MI:V:::N:L::::ET::::QT:L:::::::::::G:V
Hmu2138         :V::::A::::::::::::::::::::::::::::L:V:S:::I:::::::EP:::QD::

consensus       ARWADAVRHAQAGEDGAADRDLADAHISARWGVSLDRFERAIVEWDRERAIEDLLAGPSD
#oth            211.11212321.332331.31.13112331..1.22..321.12132113211.21.22
NP1364A         QQL:A:APDDID:----ST:ER:A:I:AD:F::G::T:::E::G:TP::TLRRA:R::M:
rrnAC0608       G::::TY:N:E:::ID:T::::::H:::QK:::::SE::GT:::F:G:K::::::::::K
Hmu0173         :::::T:::Q:D:L::YD::L:::K:VQGH:::::A:::Q:V::L:DQ::M::::GE:T:
Hmu2138         :::::::::-:::IE:Q:::T:::R:V::Q:::::::::E:V:::::R::VT:::::::E

consensus       ETEQAIEANTEALA---
#oth            213211222.1121111
NP1364A         TDIERLRRA:A::EQSD
rrnAC0608       ::K:::::::::M::::
Hmu0173         ::VD:::SL::VV::::
Hmu2138         A:::::Y::::::::::