3 genomes BUD2735 3 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC1069 - - Hmu1630 - - NP3448A -

Pairwise sequence scores
Consensus score	3425	NP3448A	rrnAC1069	Hmu1630
3020	NP3448A	3407	2833	2840
3147	rrnAC1069	2833	3380	2956
3183	Hmu1630	2840	2956	3436

443 symbols
consensus       MGLRDDLERYREVGEERRQDLSEFIQYGDLGQSRQDSVRIPIKIVDLPEFEYDQRDMGGV
#oth            ..11...1.1.1...1.....1.........1.12...21..........1..1..1...
NP3448A         ::R::::D:F:::::::::::::::::::::A:GP:::NV::::::::::A::P::::::
rrnAC1069       :::K:::::::D::::::::::::::::::::::G:::::::::::::::::::::Q:::
Hmu1630         :::::::::::::::Q:::::A::::::::::::::::Q:::::::::::::::::::::

consensus       GQGQGGQPDEGDPVGQPQPQP-DDGDEDGEDGEPGEEGGDHEYYEMDPEEFAAELDEQLG
#oth            ...1112122.....1.1.1111...1.112.....1..1............2....1..
NP3448A         ::::::T::V:::::E:E::::G:::D::::::::::::::::::::::::::::::E::
rrnAC1069       :::E:A--E::::::::::::G::::::---::::::::E::::::::::::E:::::::
Hmu1630         ::::D:::QP:::::::::D-:::::::::P:::::D:::::::::::::::Q:::::::

consensus       LDLEPKGKKVIEEKEGDFTDITRSGPSSTLDFERLFKQGLKRKLAMDFDEAYVREALKVD
#oth            ...1....1....2............1..........1............21111.....
NP3448A         :::D:::::::::T::::::::::::A:::::::::::::::::::::::E:LKA:::::
rrnAC1069       :::::::::::::::::::::::::::::::::::::K::::::::::::D:::::::::
Hmu1630         ::::::::Q::::V:::::::::::::::::::::::::::::::::::::F::::::::

consensus       GWGPATVFEWAREQNIPVSKAWIDDAYAELPADERAVWDSIEEMTDAVDRESTANRIRRE
#oth            .......1..1.1.11...1...11..111.11.211....1..1.2.1111.12.....
NP3448A         ::::::::::::D::::::R::::::::SM:::::SK:::::::::D:::::::T:::::
rrnAC1069       :::::::Y::T::::M:::::::::::E:::SE:T:::::::::E:N:EEVE:SQ:::::
Hmu1630         ::::::::::::::H::::::::EE:::::::::K::::::D::::::::::::::::::

consensus       GVDQIPFRREDERYRYPEIEEEREKNVVVVNIRDVSGSMRQKKRELVERTFTPLDWYLTG
#oth            ..111..............2....................11................1.
NP3448A         :::EV::::::::::::::I::::::::::::::::::::ES::::::::::::::::::
rrnAC1069       ::N::::::::::::::::V::::::::::::::::::::::::::::::::::::::::
Hmu1630         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::Q:

consensus       KYDNAEFVYIAHDADAWEVDRNEFFGIRSGGGTRISSAYELAAERLEEEYPWSEWNRYVF
#oth            ...1.................2....................212..11...11......
NP3448A         :::::::::::::::::::::E::::::::::::::::::::S:I::A::::::::::::
rrnAC1069       ::::::::::::::::::::::::::::::::::::::::::::V:::::::::::::::
Hmu1630         :::H:::::::::::::::::D::::::::::::::::::::LA::::A:::AD::::::

consensus       AAGDSENSSNDTEENVIPLMEQIPANLHAYVETQPSGNAINATHAEEVERHFRDADNVAV
#oth            .............12......2.......................1.1.11.112.1...
NP3448A         :::::::::::::N:::::::S:::::::::::::::::::::::Q:L:S::E:-:::::
rrnAC1069       ::::::::::::::K:::::::::::::::::::::::::::::::::::N:::::::::
Hmu1630         ::::::::::::::H::::::E:::::::::::::::::::::::::::::::ET:D:::

consensus       AYVSSPEDVLDAIYDILSTEDQ-
#oth            ..111.1..2...121..1.121
NP3448A         ::IEG:G::::::ETV::A:Q-:
rrnAC1069       :::::::::V:::::::::::::
Hmu1630         :::::::::T::::E::::::ES