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3 genomes BUD2736 3 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
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rrnAC2080

- -

Hmu2450

- -

NP2816A

-

Pairwise sequence scores
Consensus score3182 NP2816A rrnAC2080 Hmu2450
1472NP2816A 3239 558 590
1908rrnAC2080 558 3623 782
1541Hmu2450 590 782 3000

496 symbols
consensus       MHRRATLVVGAVALAALLGGAAAAAGNAEPLADAGLDQEVERATTVQLDGAGSRDPDGRI
#oth            .1122111.221111..212212121122.2.1.....2.222...1..121.11...2.
NP2816A         ::W:I:IA::I::V:::S:V:::----D::M:::::::::SVN:::::::T::TH:::E:
rrnAC2080       :::T:::::S:L::S:::::T:V:T::QP:::::::::S::::::::::AN:::::::T:
Hmu2450         :R:LPS:::LL:L::::T-IPVS:::::S:T:A:::::T:TSG:::Y::::N::::::::

consensus       QDTEWSIRDPNGTTVSPSCRTCLQTTFTPAATGRYNVTLTVTDDDGARATDTLYVTVEAA
#oth            1221.112212.1.1211.21.2111.1.221.212..11...1112211...1.1.22.
NP2816A         :TYQ:DVTHDG::::YT::M::SR:E:::S:P:T:E:::S:::GASQ::::::::::TD:
rrnAC2080       E::::::ET:D:::RT:D:P::V::::S::D::Q::::V:::::::VSRS:::H:D:V::
Hmu2450         :SV:::::::::A:::::::N:::P::::TV:::WS:::::::::::T::::::::::E:

consensus       RGPSVELDAPNAVDADDRANFEAAATSDDADLRTVSWAVNDTAVNQTRLDGENATDTITH
#oth            2..112111.22.2212222121211121.2.111112121121121211.222121211
NP2816A         -:::::::G:LT::T::P:T:::::E:P::E:E::::::E:DI:TERP:::GVD::AFQF
rrnAC2080       S::::SVS::S::P:GL:R:LT:NV:AG::::::LA:V::G::Q:::::A:::::S::::
Hmu2450         :::TLT:::::R:VP:ESTP:VVE::::G:P::S::LYHD::R::S:TV::TTTLT:L::

consensus       TFNDPGSTRLRVAVRDAAGRRGYANRTIQAADPP-----GAGGSAGGNRCPEGERRPYED
#oth            1.2121122121212.22.122121212122112111112211121.2211211222122
NP2816A         A:G::DTY::Q:V:::VN::TT:EELFV::EA::EPSGGSS:::S::TET:TP:ET:E:T
rrnAC2080       ::::S::VSV::IAY::D::::V::::::V::SS::::::N:::::::N::G:SGNY:V:
Hmu2450         ::SET:::E:LA::T:E::---:V:T:TITV::T:::::T:SAARV:D::D:::::V:MG

consensus       GRIGDCNSAAALIYETPTDTD--------GQDGIQLNRNADGEIADIA-NGDEVNELS-A
#oth            121122212222.111221221111111122..22122222112222.121211211112
NP2816A         P::::P:NEESV:::A-----::::::::--::YYQ::::GADV::S:YI:T::T:Y:FD
rrnAC2080       :QNKG:T:::MK:GD:WV::::::::::::K::--:WVHV:::LTK::::E::L:D::::
Hmu2450         :S::SMC:ST:::::::::VTMVVPTGGAS::::::YNSEQ:::VTV::T:EQ:Q::R:R

consensus       DGENGPITQEIIDTRADAAEEEIQEQ------------SYDENRREGRSDRPASTVQND-
#oth            111212212122111222221222211111111111112121222112222121112211
NP2816A         ::::A:WG:P:MEQAGGS:W:G::S:::::::::::::V:G:E:Q:-----HSC:ITG::
rrnAC2080       ::YG:TF:E:T::::T::I:::LE::TNKNGDDGGDGG:V:DGSGD:G:T::::S:P:NL
Hmu2450         EN:D:V::L:--::::----------::::::::::::T:E::K::::Y:D:T::::T::

consensus       ------------------------------------SDDMSSQDADDDDDGGENDDNRSP
#oth            111111111111111111111111111111111111.1.211222222222112222211
NP2816A         :::::::::::::::::::::::::::::::::::::I::C::V:HQIESH::TSHVY::
rrnAC2080       MNPGGGDDDDGRDDDDDGGFDWTYDDNNGSNDDGDS:::S::S:D::::::::::::SDG
Hmu2450         :::::::::::::::::::::::::::::::::::::::T:TEPEESSSESPDSVSS:::

consensus       DRDGNGYHGGGGRDDERDEGPNGGENRDD-----------DDEDGLLDGGNDDADGHADD
#oth            1221211112.2212121112222212121111111111112121222112122112212
NP2816A         :KS:T-::EY:L::V::T::::PL::::EVDKIHVTIITQPE::::V:QAS:I:::VV:G
rrnAC2080       :E:NG:WF::::D::DD:G:WL::G:D:::::::::::::::DG:W:G:::::D:DSS::
Hmu2450         Y:T::::::S:TQEE:S::STGS------::::::::::::T:SQSSS::CRSVN:::PT

consensus       DD------RGGGESA-
#oth            2111111112112.21
NP2816A         V:SAFGYV:S::::::
rrnAC2080       ::::::::G:::W:FW
Hmu2450         SA:::::::HNLL:C: