Home |  Text search
3 genomes BUD2739 3 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC2732

- -

Hmu2256

- -

NP1852A

-

Pairwise sequence scores
Consensus score2056 rrnAC2732 NP1852A Hmu2256
1384rrnAC2732 2042 925 982
1445NP1852A 925 2166 1046
1489Hmu2256 982 1046 2065

294 symbols
consensus       ------------MNFAIDSGKLLYALGVLFAAAALLYFVRDVVFGLSITVTAALLLVAFV
#oth            111111111111.1121.1.....2...1..21..1..11....1.....1.1..111.1
rrnAC2732       :::::::::::::R::::::::::::::::::::::::::::::N:::::K:::::LG:I
NP1852A         MNGVAVARLSLH:::N::G:::::V::::::F:::::::S::::::::::::L::F::::
Hmu2256         ::::::::::::::LTL:::::::G:::A::LG::V::A:::::::::::::::::::::

consensus       AFLVAGLARERDALDVVAFAISGLSYVVFLGYVVARYEPGETGIFLLLAASAGLFVGLGY
#oth            1111..1121..2.11..111..11.1..1...12..21...12.1...1..1.......
rrnAC2732       :LF:::V:L:::V:::::::L::VT::::V::::V::S:::::T::::::::::::::::
NP1852A         ::::::::ID::::::::Y:::::::A::::::T:::GL:::::::::::::::::::::
Hmu2256         G::L:::S::::L:GT:::T::::::::::::::S:::::::VV:F:::G::A:::::::

consensus       GVRAADIAPDRRTAAAVAGALLAVSAVIVGADALGGDVTYDVETNDETTVSVPDERQDRD
#oth            11.2222212...1121222.12.111211..112.1.1.2.111121.11122222221
rrnAC2732       AL::GIPT:S::::::AL:G::I:::::::::::S:G:::::Q::ESV:::::ET::GGG
NP1852A         :::QQSLDI::::::Y::VV:V::GV:FI:::LAT:::E:T::MQ::::I::T::HVE::
Hmu2256         :::E:::::G:::TIG:VI:::V:::SL:T::::::::::S:::::T:::ALSSVGS:T:

consensus       R-PRVTARIGTVTATNPSPFTRPVDLPSARGCLAGVAENDRERIDVDYEPRSFDTPDRLA
#oth            1111111221.1..1...1.1.1111..211..2.1112211222.111111211111.2
rrnAC2732       GY:P:SRQ::::::S:::::L:ALNP::VSS::V:L:::P::DVW::VD-:DW:E-:T::
NP1852A         :::::::DLW:::::::::::::::::::::::S::::FGD:TFP:R::::::G:::::D
Hmu2256         ::V:G:::V::L::::::W:::::::::I:::::::EQG::S::::::::A:Y:::N::G

consensus       GQATRSHALTGSFRVATNRTGDRTFAVERAEDCDVSRSEPTIAIVIEDDDARAD
#oth            .22112121.1112121121.2111.1..221.21211...1221212.12221
rrnAC2732       :ST:K:Y:I::E::LD:::::QV:::I::GS::S:V::::::::Q:DG::S-L:
NP1852A         :G:E:T:T::::VP:VADDP:E::Y::::::S::::HD::::VV:F:::T:V:V
Hmu2256         ::S::V:E::V::D::::Q::::R:::::RG::EPT:::::LFL:V:P::G:I: