Home |  Text search
3 genomes BUD2740 3 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC2641

- -

Hmu2860

- -

NP2652A

-

Pairwise sequence scores
Consensus score917 rrnAC2641 Hmu2860 NP2652A
645rrnAC2641 2399 513 374
688Hmu2860 513 914 384
551NP2652A 374 384 910

309 symbols
consensus       ------------------------------------------------------------
#oth            111111111111111111111111111111111111111111111111111111111111
rrnAC2641       MNCWMRSPRWPPTTDGSNSSQWVTPCSQMDRSVFSPTPSVPMKLFSTRTLSGTGWAVCKP
Hmu2860         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP2652A         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       ------------------------------------------------------------
#oth            111111111111111111111111111111111111111111111111111111111111
rrnAC2641       VGATGVVKGLQRVRLAGLRPAHREDIAIHELVFQRDDDGAIAVCTRRLRLVERLLAKRTD
Hmu2860         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP2652A         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       ------------------------------------------------------------
#oth            111111111111111111111111111111111111111111111111111111111111
rrnAC2641       EHRHTGWMGVGHIHRWGAVNECSLAIRMRWLRAPDYVYNTPRCAQLLTSESTKPNGTHGH
Hmu2860         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP2652A         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       MMTQYLVATSSVHVTAAAADYLRERLD-AADDDVVVVAVADAAAPSRDAGDAANVARSRL
#oth            21.21.1..1...1....1...22..111.11211.11.2122211..1...2...11..
rrnAC2641       T::TF:L:::::::::::::::QH:::S:::H:I:::::H:PD:::::::::V:::::::
Hmu2860         -::E::::::::::::::::::::::::P:T:E::::::RE::S:D::::::::::::::
NP2652A         :G:::::::D:::T::::C:::DP::-:::::T:T:AT:::G---:::G:::T:::TV::

consensus       AAH-APTTETRDGDPETAILAAADERAPDVLLIGPHRGE-EAADGVGSTARALLERAARP
#oth            .1212111.12.1112122.2.221121.1111..11.2112221..111.21112122.
rrnAC2641       ::F:M:A::::::A:V:E::::V::HD::E::::::::T:DDS:::::M::D::TNVD::
Hmu2860         ::V::::V::P::::TETL:D:IER:::::V:A::N::V::G:E:::::L::::::::C:
NP2652A         :G:EVT:::LD:E:V:::V:G::T::SA:::I::::A::P::GPA::R:::NII:G:TV:

consensus       VVVVPLPAR
#oth            .1.1..122
rrnAC2641       :I:L:::--
Hmu2860         :::::::E:
NP2652A         ::::::S:Y