3 genomes BUD2741 3 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC0892 - - Hmu1577 - - NP3654A -

Pairwise sequence scores
Consensus score	1465	NP3654A	rrnAC0892	Hmu1577
877	NP3654A	1655	554	528
979	rrnAC0892	554	1416	807
1077	Hmu1577	528	807	1435

230 symbols
consensus       MDSSDDDLAALADELVTTLQALETEL-EPRRDD-GRPRPPTPAELLRFTSDVTIPALILL
#oth            121111..121221.11..12.11.21..121211211..1.2..1.1.1111...2.11
NP3654A         ::DRER:::EA::::AE::E::RE::T::::GPL:I:Q::R::::::::EQY::::::S:
rrnAC0892       -M::::::T::ITD::::::D::::V:::TT:S::L::::::G:::::::::::::V::V
Hmu1577         :S:::::::S:VG:::::::R::::F::::D:::D:L:::::R::M:L::::A:::T:::

consensus       LRANIEALKLLARALRMADGRPPSTD-----------SAGREVRARAAALSATTLSKLDG
#oth            1221.11.1..2111.111..121111111111111111121112.1221.21..11..1
NP3654A         FE:S:RT:E:::AGI:LV::::V:::DDRDRVVAAFEA::::GGD:L::A:H:::R:::D
rrnAC0892       :KS::::::::R::::::E:::T::G:::::::::::::SG:::Q::SD::RA:::R:::
Hmu1577         ::T::::::::Q:::::::::A:TA:::::::::::::E:SD:::::ER:::::::::::

consensus       ALADLQAAVEGQ-PEDEEARELLQEARRLRADIRDRLAAASNAS-------KEGGSAAGL
#oth            ..11..2.11.21.2.1.1...12..12..1212211112122.1111111221222122
NP3654A         :::E::::AA:GD:G:::I::::S:::S:::EVS:Q::::TD::DISSPDS:G:TTD::T
rrnAC0892       ::T:::Q::::T::::::::::I:::QQ::GQ::E::::E:EV::::::::---------
Hmu1577         ::::::D:::::::T:D::::::T:::::::::ES:IEER::G::::::::P::::::S:

consensus       EADDDDEGTDVP-----VDVDAELRSIKDDVDG---DDTDADADDANNNE
#oth            11212.121..1111111...1..1.1.1112111111112121122221
NP3654A         DTS:::A::::SSSEVGI:::E::A:::RT::::::G:S:::::ATD:::
rrnAC0892       ::V:P::V::::::::::::::::::::::IE:PDR:::GTENG:G:GE:
Hmu1577         :::GE::SE:::::::::::::::::L::::S-::::Q::S:D:::S---