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3 genomes BUD2744 3 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi
-

rrnAC2434

 - -

Hmu0141

 - -

NP3068A

 -

Pairwise sequence scores
Consensus score730 NP3068A rrnAC2434 Hmu0141
448NP3068A 730 387 371
603rrnAC2434 387 739 513
614Hmu0141 371 513 731 

100 symbols
consensus       MGIDRLARQVEKERRDLQILEAVIENGPIGIVRLAEEADVPEHKVRYSLRMLEDDELIEP
#oth            112...12.11..2...21..111121....111...12111..1.1.1....1.1.11.
NP3068A         -M:::::::LR::E:::LV::IILQQH::::E:I::::GLD:::T:H:M::::::D::::
rrnAC2434       ::M:::ED:::::G:::S:::::::::::::::::::T:::K::::::::::::::::::
Hmu0141         ::L::::E:::::::::::::::::H::::::H:::::E::::::::::::::N:::VQ:

consensus       TPQGAVPADNIAERIATINNGIDRLRDRLEELKDIF-DAE
#oth            ..1..1.2.2121.111112.111.211212.12211211
NP3068A         :::::::T:GVE:::GR:HG:::S:I::M::::QY-:GNQ
rrnAC2434       :::::I:V:::D::V::::::::::VEQ:DG:R:V:AS::
Hmu0141         ::E::::::D::A::::M:Q:LE:::::T:T::T::::::