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3 genomes BUD2749 4 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi
- -

HVO_A0371

HVO_A0443

 -

Hmu2390

 - -

NP3840A

 -

Pairwise sequence scores
Consensus score1306 Hmu2390 NP3840A HVO_A0371 HVO_A0443
455Hmu2390 1314 402 271 327
668NP3840A 402 2271 481 499
1036HVO_A0371 271 481 1291 1085
1109HVO_A0443 327 499 1085 1297 

315 symbols
consensus       ----------------MILRYYADADNREDHDQALRLLRTIHDEHGIAVEIDRIDEQHGP
#oth            111111111111111112.....1.23321.21222..3112.211.1...211221212
Hmu2390         VGRLDRVRLTEINFEP:H:::::E::TDV::R:TVE::ES:A:R:A:::::VQVEP:RA:
NP3840A         :::::::::::::::::K:::::::P:YD::E:IID::Y::S:KY::T:::E:VNNRY:S
HVO_A0371       ::::::::::::::::V::::::::EIS:W::H:::::K:L:::Y::T:::::::::::L
HVO_A0443       ::::::::::::::::::::::::::V::W::H:::::::L:::::::::::::::::::

consensus       ITDFPGDVRERTPEDVYDRDLKRNRALNQNIDQTPSEAFKRYGR-LDIAGNVGIVDDGGT
#oth            121.1.2113311111111.121.12.2131212..211122.212.12.112111.121
Hmu2390         PE::S:T:EH::LAEAW:-:FTY:P::Q:GLGEP::SCYD--:P:E:LV::::::V::D-
NP3840A         :QV::::I::NS::::::::FHY::T:GS:::ES::Q:::AS::HV::D:Y:::I:::--
HVO_A0371       ::::::E::YP::::::E:::::::E:::V:E:::::::::::K:::::::ISV::::::
HVO_A0443       :::::::::SS:::E::E:::::::::::T::::::::::::::::::::::AV:::E::

consensus       LVWASTLPGYADGYRPDADPSRTAMDFLEDIAA-------------AERNRTCIECL---
#oth            12..1122.222.111212123.121..12213111111111111131121221122111
Hmu2390         ::::TRFW:THH:WG:-V::EE::IG:::AV--:::::::::::::E::GV:A:DER:::
NP3840A         ::::T:NR:DQI::G::V::TD:TLG::DQA:NHGLEAIEEKYMDED::E::V::QFLTA
HVO_A0371       VW:::::::::::::L::E-::::::::::::::::::::::::::SPS::L:V::::::
HVO_A0443       VR::::::::::::::G:A-:Q::::::::::T::::::::::::::PS::I:V::::::

consensus       ---------------------------------------SLLDGDES-------------
#oth            111111111111111111111111111111111111111222221121111111111111
Hmu2390         :::::::::::::::::::::::::::::::::::::::--------:::::::::::::
NP3840A         DVVDGTVHRDVVVGTSQLPDSPAHGVDSSVGEIVTRTVDAIIET:::DWIVQTAKTFEAS
HVO_A0371       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
HVO_A0443       ::::::::::::::::::::::::::::::::::::::::::::::N:::::::::::::

consensus       ---------LCPNCGYEFP-----------------------------------------
#oth            111111111121222122221111111111111111111111111111111111111111
Hmu2390         ::::::::::P:EAQFLEES::::::::::::::::::::::::::::::::::::::::
NP3840A         AFDTALGQI:VRDRL:R:DTGTNTDTTLAIVFNTVPWELDIDAVPATVDQLTAISDGPDV
HVO_A0371       :::::::::F:::::::V::::::::::::::::::::::::::::::::::::::::::
HVO_A0443       :::::::::F::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       ---------------
#oth            111111111111111
Hmu2390         :::::::::::::::
NP3840A         RVFAGRDREFKEVTE
HVO_A0371       :::::::::::::::
HVO_A0443       :::::::::::::::