Home |  Text search
3 genomes BUD2759 5 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC0534

- - -

Hut0337

-

NP1210A

NP3590A

NP4782A

-

Pairwise sequence scores
Consensus score3251 rrnAC0534 Hut0337 NP4782A NP1210A NP3590A
2477rrnAC0534 2935 2316 2433 2361 2377
2805Hut0337 2316 3222 2701 2694 2723
3053NP4782A 2433 2701 3241 2929 2953
3122NP1210A 2361 2694 2929 3239 3196
3151NP3590A 2377 2723 2953 3196 3249

413 symbols
consensus       MEHSHRYRAYPTQEVAERLEHHLDVHRQLYNHVRWDYENAPEDDKPSEYDQNNKLPEWKR
#oth            ..1.1..2....12..11..111.1.......1..1.112.2.1....11......1..1
rrnAC0534       ::::Y:::::::EG::DE:::QV:I::::::::::::T:S:V:A::::F::::::::::Q
Hut0337         ::Y:Y::Q:::::A:::::::::::::::::::::::::R:A:::::::E::::::::::
NP4782A         :::::::::::::::::::::::::::::::::::::::S::::::::::::::::::::
NP1210A         :::::::H::::::::::::R:::::::::::I::E::Q:::::::::::::::::G:::
NP3590A         :::::::H::::::::::::R:::::::::::I:::::Q:::::::::::::::::G:::

consensus       KWPVFSELHSKAAQATVARFHRNLSNLRKKKEKGYNVGRLKRQAPTDYRSVTYNQSGFDL
#oth            ...1.3111............1..11.1.2..2.11..1.1....11...1.........
rrnAC0534       :::::A:TY::::::::::::::::::::Q::N:HT::::::::::::::::::::::::
Hut0337         :::L:RD::::::::::::::H::TV:S:L::R:::::::T::::S::::::::::::::
NP4782A         :::::G::::::::::::::::::::::::::::::::Q:::::::E:::M:::::::::
NP1210A         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP3590A         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       DEKRGHDRFAYVRFSKIGWVKIRYHRPIPDHATIKEVTFKKETTGEWFVSFGLETDDADL
#oth            .....2.22.1.....1.......1....1211...1.1.1.............1..12.
rrnAC0534       :::::Q:G::::::::V:::::::S::::ADSS:::A:::::::::::::::::I:::N:
Hut0337         :::::::KD:::::::::::::::S:::::::::::::V:Q:::::::::::::I:::T:
NP4782A         :::::R::::::::::::::::::::::::F:S:::::V:::::::::::::::::::::
NP1210A         ::::::::Y:H::::::::::::::::::::::::::::::::::::::::::::::T::
NP3590A         ::::::::Y:H:::::::::::::::::::::::::::::::::::::::::::::::::

consensus       PEKPDVDSLDASNSVGIDLGILNYIHTSDGKTVDWLDLEDEYERLRREQRKLSRKERGSN
#oth            ...11.2..11..........1........1..1..1..1.......21.1.....3..1
rrnAC0534       :::::::::NP:::::::::::::::::::::::::N::G:::::::AH:::::::Q:::
Hut0337         ::::::::::::::::::::::::::::::T::E::::::::::::::::T:::::K:::
NP4782A         ::::::N::::::::::::::Q::::::::::::::N::::::::::Q::::::::E:::
NP1210A         :::T::E::N:::::::::::::::::::::::::::::::::::::::::::::::::S
NP3590A         ::::P::::::::::::::::::::::::::::::::::::::::::::::::::::::S

consensus       NYEKQRLEVAKVKRHIKRKVLDYQHKITTWLVKEYDAVFVEDLNVKGMLEQSHNARNKQD
#oth            ...1..32..11..2.2...........11..1..1.....1.1.11..2211.1....1
rrnAC0534       :::N::V::::A::D:H::::::::::::::::::::::::::::QS::RADG:G:::::
Hut0337         ::::::KQ::T:::R:R:::::::::::KY::R::::::::::::::::QGDG::::::N
NP4782A         ::::::R:::::::::::::::::::::::::R::::::::::D::::::::::G:::::
NP1210A         :::::::K:::::::::::::::::::::::::::A:::::E::::::::::::::::::
NP3590A         :::::::K:::::::::::::::::::::::::::A:::::E::::::::::::::::::

consensus       AAWRQFITLLEYKADLYGCHVVQVEARGTTKECASCGVETAKPIWVREHSCPSCGFETDR
#oth            .....1.......1.11.1......12.......2....11.1..111............
rrnAC0534       :::::C:::::::G:V::T:::::::A:::::::V::::SS:S:::::::::::::::::
Hut0337         ::::::::::::::::H:T::::::PE:::::::R::::::::::IK:::::::::::::
NP4782A         :::::::::::::::::::::::::::::::::::::::S::::::::::::::::::::
NP1210A         :::::::::::::::::::::::::::::::::::::::::::::::K::::::::::::
NP3590A         :::::::::::::::::::::::::::::::::::::::::::::::K::::::::::::

consensus       DANAAMNVLQRGFSELGLGWPEDTPVETVTATDTPEFQCVSASHVVETGSLGA
#oth            .........1.1.2211111111111111111113323311111111111122
rrnAC0534       :::::::::::::LN--------------------------------------
Hut0337         :::::::::::A:Q::::::::::::::::::::IQ:ES::::::::::::PS
NP4782A         :::::::::E::::A:::::::::::::::::::DDIHE::::::::::::::
NP1210A         :::::::::::::::::::::::::::::::::::::::::::::::::::::
NP3590A         :::::::::::::::::::::::::::::::::::::::::::::::::::::