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3 genomes BUD2760 3 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
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rrnAC2404

- - -

Hut1495

-

NP5332A

-

Pairwise sequence scores
Consensus score4175 NP5332A rrnAC2404 Hut1495
1912NP5332A 4264 1522 1507
3514rrnAC2404 1522 4150 3040
3476Hut1495 1507 3040 4167

568 symbols
consensus       --MRTIELACHELAANLLFNDDG------LAPFFAADSAVKAGQGSKSGRFQANGERWHA
#oth            11121121.2..221..1121..111111.1..1.1112.1212..11121222.12122
NP5332A         MNAEL::P:W::V:V::I:G:::HCCSHG:E::Y::ERI:RNNG:::R::C:V::HTVSL
rrnAC2404       ::::::G::P:::H::::::S::::::::::::::L::E::::E:::::E:LQD::::VV
Hut1495         :::K:VT:::::FN::::YS:::::::::::::::::::::E::::Q:AK:S:E::Q:::

consensus       RLSYQDSNIIHPGERTPQGTDFRLDTIREYRIKVARDPEEDDVGQQDFNAHIAPRWPAMQ
#oth            1.1.11.11211.121121.122.2121.1.1112121.1.21.211121.1...1.2.2
NP5332A         Q:Y::::G:---:SLNHPS::--::::::F::SWEIVD:D::::ERSG:I:::::T:K:T
rrnAC2404       :::::::::V:::::::::::WQ:QNM::::L::::H::::S::::::V::V::::::::
Hut1495         ::::ES::L:::::K::L::E:::E:VK::::::F::::::PI:K:::T::::::::G:K

consensus       GERDDGSRIEIPVPDGFGEGVNVRVKGSNIAFERYPALLARAAAALGIAGRYFRDPHI--
#oth            1122.11221.11.21111.1.11.1...22111.12..2..2211.221...2211211
NP5332A         DTNG:S----:ST:PDL-T:::CT:::::FPL:E:D:::H::TS:::FNE:::SPDR:HQ
rrnAC2404       ::::::::::::::::::::::::::::::E:H:::E::Q:::IEI:VT::::EE::L::
Hut1495         ::KT:::LK:::::K:::::I::::Q:::V::::::D:::::G::::::::::::::P::

consensus       -YSNIQDAERYARLHRDASGPVHARDGPIAAMGHLLESDRSGYRKHVQNDDDERGRNLPG
#oth            111.1...11.1.11.111.11..1..1..2111..11..1....2.11.11121221..
NP5332A         E:::::::A::V::I:NET:TI::V::V::RISN::A::::::::::AD:TEA-----::
rrnAC2404       ::::V::::K:::I::::::::::::::::::::::::::R::::V::::::::::::::
Hut1495         :MT:::::::::::::::::::::::::::S::::::D:::::::L:::::::K:EK:::

consensus       YYHTATLGPKRIREAFPDHHLPKEVKHYYAREADSLDDDHPLAHPKVGASLQVSRLDDDE
#oth            ....1.1.11.11.1111.1....1...11..12111211.12...111...1.1121.1
NP5332A         ::::::I::::AS:LVDQ::::::I:::LP::S::::PEN:VY:::LE:::::::V--:G
rrnAC2404       :::::::::::::::::::::::::::::::::L:VP:::::S:::::S:::A:L:::::
Hut1495         ::::V:::ER:::::::::R:::::::::::::KR::E::::::::::::::::::G:::

consensus       TVRWRDLDRLERELDQTVLSVL-------ADAGIDIA------PSDGRGPFVEDAYFEPE
#oth            1.1.1112111....111.1..11111111.111111111111.12.2...1.12..211
NP5332A         P:Q:SERS:VA::::EVL:N::RWEDFPVT:DELEAGDRDGGD:PG::::::::E::GA:
rrnAC2404       :::::::ET::::::::::::::::::::::::::::::::::::-:S::::::S:::::
Hut1495         :::::::::::::::::::::::::::::::::::::::::::::::N:::F:G:::T:D

consensus       LDRSGPRPIGLDLTRVRQQQESVVVRHLADGLRPSQWEALEALVTDGGEVAPADIADDHD
#oth            2121112121111111212...1.11..11.12121111.12..1...111.2...2221
NP5332A         TS:RQR:LLDDPTPELQD::::L:MK:::G:FED:DADV:D:::::::::S:Q:::EQK:
rrnAC2404       ::H:::E:V:::::::E:K:::::::::S:::S:V::::::M::A:::Q::::::::EYG
Hut1495         V:E:::K:::::::::::S:::::::::::::::T::::::T:::::::I::K:::H:::

consensus       RHVETVRRALRRMEDLVDRDYAEVSLRSEYVAELVHAAVAEARESARRAAETAAKAAEAA
#oth            1...1112.1121..11222.111....111..2.121.21..11221.11.2.112.11
NP5332A         W::::IYK:VD:L::II:HS:G:L::::HHI::K:CEY:QS::R::VD::::L:RSL:-H
rrnAC2404       ::::S::::::E:::::IS:::D::::::::::M:::::D::::AT:::VD:::::::::
Hut1495         :::::::S:::D:::::H:E::::::::::::::::D::::::::VK:::::T:::M:::

consensus       ERGLENTMSAFIAWAARHGVDVNDAREAQLTLRFGRH----EDHGRAIREGFRVWKDAGL
#oth            .1.112111.111.11.1.1..2.1.1.111...1221111122121111.111.11..2
NP5332A         :V:::LAND:LVE:VD:F::::E:R:D:::A:::::VEMTR:EFSV:LTT:LHQ:MQ::W
rrnAC2404       :::::::::::::::::::I::K::::::M:::::EI:::::K::K:::::::::::::M
Hut1495         :::MGE::::::::::::::::::::::R:::::ND:::::T:V::S:::::::::::::

consensus       PEERYRQAQVQLR-DGSRGDAWRWLAMG
#oth            11..112.2.2221..1.1211111221
NP5332A         KR::FLE:E:EV:L::G:YQMRAYDL::
rrnAC2404       ::::::::::::S::::::T::::::TE
Hut1495         ::::::M:K:LFQ::::::::::::TP: