3 genomes BUD2766 4 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - - - Hbo2592 Hbo3295 - Hut2434 - NP3878A -

Pairwise sequence scores
Consensus score	2302	Hbo3295	Hut2434	Hbo2592	NP3878A
1444	Hbo3295	3424	1152	1116	1196
1714	Hut2434	1152	2349	1299	1466
1717	Hbo2592	1116	1299	2315	1491
1828	NP3878A	1196	1466	1491	2295

450 symbols
consensus       ------------------------------------------------------------
#oth            111111111111111111111111111111111111111111111111111111111111
Hbo3295         MEDESDVTMPPENPFTKGNNYDHAPYSDLDKPLPTEGHFYELHPFKSDYELVTRYTDLTG
Hut2434         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hbo2592         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP3878A         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       ----------------------------------------------MMRLDRARGILLGL
#oth            11111111111111111111111111111111111111111111112333.113.11...
Hbo3295         FDLLETPSEHQSSRQLSLQAERIRRTWGLEATADNTIGRDVDDQELIT::::SI::I:::
Hut2434         :::::::::::::::::::::::::::::::::::::::::::::::VST:A:E:V::::
Hbo2592         ::::::::::::::::::::::::::::::::::::::::::::::-:DS::::::::::
NP3878A         :::::::::::::::::::::::::::::::::::::::::::::::STV:::P::::::

consensus       ACGDALGRPVEFTSASEIEREHGTLDEMIGDGTHNQPAGTITDDTELALRIARSLVEHQE
#oth            .1.......1..21221.2211.21111312.1121....1....11..21111.11232
Hbo3295         ::::::::::::M:S::::A::::VTKFF:::S:::::::V::::N:::YLVAN:LA:G:
Hut2434         :::::::::L:::PCD::A:Q:::VT::LA::::GK::::V::::::::::::::::NER
Hbo2592         :Y:::::::::::::::::T:::R::::V:H::W::::::::::::Q::C:::::::::A
NP3878A         ::::::::::::R::TQ:K::F:Q::::::N:::K::::::::::::::::::::::QK:

consensus       FDGADIAERFVEWFESDPFDIGLMTADALRRLQNGDDWDEAGQEVWEQRAEGQNAGNGSV
#oth            .12112111111.1211...1.21.221132231.33121..121113131121......
Hbo3295         :NA:RY::QL::::::::::V:VT:ISSITW::::VPAS:::HKTL:S:GANNA::::::
Hut2434         :::Q:::D::L::::D::::::::::::::EYSH:T::RS::::::QH::::S:::::::
Hbo2592         ::P:::S::::A:YD:G:::::R::MRS:S::KH::E::::::H::::SR::::::::::
NP3878A         :::::V:::::::YR:G::::::::::::Q:IE::ML::::::::::E:P::::::::::

consensus       MRCAPLAIAFADDPDRLAEVSRQSSAITHADPRCTYGCAILNLTLAGLLAGEDEPLRDAL
#oth            ...1.21.1122.213.221.12..3...1....12...1..1.2.12.31212.132..
Hbo3295         :::::::::YP::QQM:Q:M::K::E:::::::::H:::V::::::AI:N:SE:::QV::
Hut2434         :::::H:::::::::T::R::K:::::::H::::Q:::::::E:I::Y:R:::D:FG:::
Hbo2592         :::P::::PY:T:W:::::::::::Q:::::::::A::::::::V:::::DAET::E:::
NP3878A         :::::YS:::SE:::Q:LS::KA::R:::::::::::::V:::::::::H:::::::R::

consensus       ARVSDDAPDELVEALRPVADGASDDDLENSGYVVHSLQTALHDALTADSAEDAIVSAVNR
#oth            3212311.2..112122112231311.11..1.211.1...11112.....2...1...1
Hbo3295         TAL:::::A::::R:ER:P:EV:E:::::::F:LDT:E:::YYG:::::::::::::::N
Hut2434         :::DGE:::::::T::L:P:LID:T:::T::::::T:::::Y:::::::::A::::::::
Hbo2592         DY::T:V::::LT:F::L:R:E:P:T::T::::::::::::::G:V:::::::::T::::
NP3878A         N::RSE::E::::::D:::K:::I:T:R:::::I::::::::::FA:::::E:::T::::

consensus       GGDTDTIGAIAGAVAGARFGAG------------QLPDRWLNA----IDEREDLID----
#oth            ...1.....11.111......211111111111131.1...3311111.22111231111
Hbo3295         :::A:::::V::TIV:::::::WRLYRVDHKPDSTF:A::::DLRMD::SY::Y:IPDLL
Hut2434         :::::::::V:::::::::::E::::::::::::S::::::DP::::L:Y::::SL::::
Hbo2592         :::::::::::::::::::::S:::::::::::::::::::G::::::::ADE:ET::::
NP3878A         ::::::::::T:::::::::::::::::::::::G::::::ET:::::::::E:::::::

consensus       ---------------LARRLAEIARS----
#oth            1111111111111111.2313233322221
Hbo3295         EAGQLTERGIKTGSKI::QSRKL::NSGRA
Hut2434         ::::::::::::::::::L::TTEI:ASV:
Hbo2592         :::::::::::::::::E::V:VP--::::
NP3878A         :::::::::::::::::LE:H::ST:::::