| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||
|---|---|---|---|---|
| Consensus score | 4454 | VNG0006 | hla2252 | NP4654A |
| 3360 | VNG0006 | 4478 | 2705 | 2720 |
| 3587 | hla2252 | 2705 | 4572 | 3044 |
| 3630 | NP4654A | 2720 | 3044 | 4510 |
620 symbols consensus MCGITGYVG--------DGDALDPTGAIVHEGLRNLEYRGYDSAGIALVGGGS-LSVAKT #oth ....1..1.1111111111212112121.11..1...........1..11111111.2.1 VNG0006 :::::::I:::::::::----T::::R::::::Q::::::::::::::A::::::::H:: hla2252 ::::I::::ELDSGGQT::G:V:SV::::::::::::::::::::V::::AS:G:T:::R NP4654A ::::::::::::::::::::::A:----:LD::::::::::::::::::D::A:P::Y:: consensus SGEVDAL--AVPDREDATRGIGHTRWSTHGPPTDANAHPHTDCTGDVAVVHNGIIENYEA #oth 1...12.1121.122111211.........1..12........1111.......1...11 VNG0006 G:::GD:::P::S:::G:::::::::::::E::RE:::::::::::::::::::::::A: hla2252 :::::G:::T:::VP:::H:V::::::::::::::::::::::A::::::::::V::::: NP4654A :::::::VA:A::ESE:NCA::::::::::::::T:::::::::EKI::::::::::::T consensus LAAEL-ADHEFTSDTDTEVIPHLIEERLAAG--AALLAAVQRVTDRLDGSYAICAVAEGN #oth .211.12..2.1.1.....1...1.121.111122112..11111..2....21212112 VNG0006 ::D::R:::V:H:::::::V:::::TH::D:::VS::T::::T:E::T::::LAIT:A:H hla2252 :K::::S:::::::::::::::::::E:::DPD:D:::::R::E:::E::::::::R::: NP4654A :Q:D::D::T:::E:::::::::L:::R:::::D:HVE:::A::::::::::F:V:F:DF consensus DGIIVARRDSPLVLGHGETGAFVASDVTAFLEHTRRVTYLEDGDIAALDEDEVTVYADGE #oth 11.111.21...11.1.11121....1.1.111.12.1..111.1.2.2212111121.1 VNG0006 :::V:::S::::L::::D::T:::::A:::I:::N:::::RN::::H:T:T:W:::N::A hla2252 :R::::::G::::::R::NAS::::::::::::::D::::::::V:::SP:G:EIV:R:: NP4654A E:::AV:H:::::V:::::::Y::::::G::DR::Q:S::::N:::V::G:-::::R::: consensus RVDRAIETIDWEADAAEKGGYDHYMRKEIHEQPRSLRQTIAGRLDVDGGDVDLDVSLSEE #oth 112121.122.1....1.1..1...1.......21...111..111111..1..111121 VNG0006 ::S:D::AL::S::::G:S::::::L::::::::A:::A:S::ISDL:T::T::ME::T: hla2252 P:E:EV::VT:::::::::::::::::::::::E:::::L:::::::A::::::::FPPG NP4654A :I:P:::::E:::::::::::E:::::::::::Q:::::::::::::::::::::::::: consensus QLQNLAEIRIVACGTSYYAGLYAARLFETLADVRATVEIASEYEFGGGRDPDRTLVVAVT #oth 2.1212.121.......1..1..11.1.11.11111.21....1111..2.21..1..1. VNG0006 T:::V::LQ::::::::H:::::KE:L::H::LPV::HV:::::LR:::S:ED:::::I: hla2252 F:AD:E::::::::::::::R:::::::D::G::::::::::::::A::T:::::::::: NP4654A :::S:D::EF:::::::::::::::::::::::::S:T:::::D:::::::W:::T:::: consensus QSGETADTLAAIRAAAQAGARTLAVTNTLGSTVTREVDDAAFIRAGPEIGVAATKTFASQ #oth .........2.2.2.211..2.1.1...........1.122................1.. VNG0006 :::::::::::L:S:::K::P:::L:::::::::::A:::L::::::::::::::::V:: hla2252 :::::::::G:V:R:NA:::::F:::::::::::::::GT:::::::::::::::::::: NP4654A :::::::::S:::::K::::Q::::::::::::::::::SV::::::::::::::::::: consensus VATLALLAVAVGRARNALRAGDAAALLEALRALPGAVQQVLDNEPQVAEAAREYADSEAF #oth ...1.1.1121..2.1.12111.2211121.2..........21121212111.1.11.. VNG0006 :::A:::TMHI::::::IST::::::RD:I:D::::::::::QA:EI:SIG::::::D:: hla2252 :::::M:::::::D:G::G:A::RSV::D::G::::::::::E:E::R::::::G:G::: NP4654A :::::::::Y:::R:::::::R:ST:::N::::::::::::::::V:E:L:DT::::::: consensus FFVGRALGRPVALEGALKLKEISYDHAEGFAAGELKHGPLALVTDETPVLAVLTDGARAE #oth .11..2112.....1...............1.............21...1.1..111111 VNG0006 :Y:::RA:::::::S:::::::::::::::S::::::::::::::N:::V::::EY:AP: hla2252 ::::::::V:::::::::::::::::::::::::::::::::::P::::::::::::::D NP4654A ::I::E:AY:::::::::::::::::::::::::::::::::::E::::::S::::S::: consensus RTANNVKEVQARGAPVIGAASAAGDARR--ADVQIEVPACGLVEPLVANVYLQLFAYHVA #oth 2.21..1.1.2...111121.1212222112.12221.22.21..11...11......1. VNG0006 ::::::::::S:::D:::L::D::T::H:::::T:TL::::PL::V::::A:::::::I: hla2252 E:M:::T:A:T::::AL:CV::GDEYDT::L::SF:::DV:V:::::::::::::::::: NP4654A K:HS:::::::::::::A::::D::GT:PAV:E:LP::NI::::::A::::W:::::::: consensus NNKGRPIDKPRNLAKSVTVE #oth 12...1.............. VNG0006 :E:::::::::::::::::: hla2252 :D:::A:::::::::::::: NP4654A A:::::::::::::::::::