| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||
|---|---|---|---|---|---|
| Consensus score | 2433 | hla2389 | NP1894A | rrnB0307 | hla1301 |
| 1583 | hla2389 | 2498 | 1411 | 674 | 764 |
| 1619 | NP1894A | 1411 | 2998 | 733 | 738 |
| 1158 | rrnB0307 | 674 | 733 | 2338 | 915 |
| 1283 | hla1301 | 764 | 738 | 915 | 2512 |
431 symbols consensus M-D------WNRGRLGLTALIALSALLALFVIRPFLQYILAGAVLAYVLFPVQRRLE--- #oth 121222222233233312323332321312122.1111113212...1.2.213.11111 hla2389 :P:RSAPPT:LV:KP:::::VL::S::::::LL:Y::F::F:V::::I:::::Q:A:::: NP1894A :D:GDDLSE:FSD::T::VVT:V:VV:G:L:VI:Y:E:V:L::::::::L:::::::::: rrnB0307 -:-::::::--------------------ML:::::::::GAVL:::::Y:L:I:::::: hla1301 -:-::::::M:::QSF:LL::GSV:::T:::::::IE:VI:S:I:::::::FHV::SRGL consensus -------------AHVGPMLAALSIVVAAVLAFLLPLAYVLAIAVRDADRIARALGNGDI #oth 111111111111132122221.2212232222122.232212222232321222322231 hla2389 :::::::::::::Q::R:TI::IV::LG:L:FV:I:II:L:T:::QQSL:VVS:VR::Q: NP1894A :::::::::::::::::RLV::V::S::T::::::::LT:::::L:E:VAV:T::QR:VV rrnB0307 :::::::::::::TY:S:::::::L:TL::TG:VA:VVV:::SIMES::::L:EF:TDPV hla1301 QEGLSNRFRESLARQL:Y::S::FLI:SSIV:VI:::::ISWVF:::LTE:::--::S:: consensus DVAAIELELAELTGEEIDLVALLESNGRRIATAIQ--VERAGRAVGTIPRLLIGLTLALF #oth 11331.322322..321122321313233112311222312333222223221.12211. hla2389 :::S::-::L:S::YR::::::Y:::QE::::SL:EVTSG:IDLA:SL:G:F::::IT:: NP1894A ::PG:::WVE:T::F:V:::N:YSTYEGQ::S:::SI:T::M:V::G::S::::::VTV: rrnB0307 QLDIL:SRIKG:::V:V:IAGE:V:S::D:G:I:-:::::STQ:FS::TFH:::IA:::: hla1301 ::E:::T:::A::::Q:EVGEV:TTV:QVL:NTL-::FGGL:GI:T:AL:ASV::S:::: consensus LLFALLRDGDALVAWLRRTLPLDADVQRDLRAELDALMWASVVGNVAVAAIQAALAGVGL #oth 12111.2.133112.13212.1131123113322.32121112.112..22.1311.11. hla2389 V::::::::EQ::::VQWV::V:E:ILDE::EG::Q:::::::::::::::::::L:::: NP1894A V:::::::RGK:L:::Y:V::V:DG::QE:FR:::R:::::::::::::::::V:L::A: rrnB0307 :IYY::K:::D::D::H::V::PV:::::FY::I:DV:LGVLF:H:F::IV:GIV::::: hla1301 :VYYT:L::P:F:R:::Q:S::P:::TS::VDRV::MTRGV:I:HIV::LL::LV::L:: consensus AAAGVPNVVFLTVVMFVLALLPLVGAFGVWGPAAAYLAAADRPTAAAALAVYGVL-VALS #oth 22212.212.1.2112..211..1.112..11123..31312121213122.12121322 hla2389 :I::L:A:I:::::T:::T:::::::::::V:::M::L:VG::I:S::I::::L:::TF: NP1894A VLLD::V::::::TT:::S:::::::::::V:VSV:::V::::::::L:V:::S:::S:: rrnB0307 ::T::::AM:W:A::V:::MV::I:TIP:::G:VI::Y:T:E:LL:VG:FL:S:II:G:T hla1301 W:::I:::::W:F::A::::V::::::F:::::::::V:I:QV::GVF::I::::VI:MV consensus DNYLRPALIDRQAALNPAIILLGIFGGIYAFGAVGLFIGPVVLGGAKATLDVFARER--- #oth .2.2..221113121.1.1.12.11..2121.22..12..1.1.21122.2212223111 hla2389 :T:::::::G:TG:F:S:::VI:::::LVV:::::::::::::::::LV::C::::H::: NP1894A :::F:::::G:SG:::::::VV::::::V::::::::::::::::::V:::::::::AAA rrnB0307 :D::::FAV::Y:K::::V:::::L::A::::VM::LF::::::AL::A:R:GLDTW::: hla1301 :::A::IV::Q::H::::V::::V:::::SI:FT:::V::I:I:VLA:::ET:REDY::: consensus -----------DAIAGEPTA---------------------------------------- #oth 111111111112323232231111111111111111111111111111111111111111 hla2389 :::::::::::---T::::::::::::::::::::::::::::::::::::::::::::: NP1894A TGRTAPEWDGD::V::S::DGDAANSGNDGEQGEGAADDADAGGEGDADGEAAASTATDA rrnB0307 :::::::::::SQ:DDGNIG:::::::::::::::::::::::::::::::::::::::: hla1301 ::::::::::::L:------:::::::::::::::::::::::::::::::::::::::: consensus ----------- #oth 11111111111 hla2389 ::::::::::: NP1894A GDEADDNDDRA rrnB0307 ::::::::::: hla1301 :::::::::::