| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||
|---|---|---|---|---|
| Consensus score | 3608 | hla0222 | Hmu3011 | NP2516A |
| 2247 | hla0222 | 4490 | 1490 | 1348 |
| 2448 | Hmu3011 | 1490 | 3574 | 1596 |
| 2406 | NP2516A | 1348 | 1596 | 3537 |
601 symbols consensus -MDAPDDAVLLDHAQDKIAVIDEDGTYQYLNAAVARLLGYDPDDLVGENAFECMHPDDRD #oth 111212211...2111..1.2.11.11111.2.1221..111.111.211.121..1112 hla0222 MS:S::P:::::L:G:::::L::::IFRH::::::D:::FHS:::::TD::ALV:::NEE Hmu3011 ::NR:V:R::::Y:::::::V:R::::::::R:AKTI::::::::I::::::F:::S::: NP2516A ::::ETL:S::::S:A::V::::A:::::A:D::S::::::::AF::L:T:::::::::P consensus RLRARFE-RIASADEGADETVEYRHRQADGGWVWLETRLSNREDPEIDGYVASSRDISDR #oth 22221.112121221221111...1.211......1112112222121...21.1..121 hla0222 ::QET:A:::V:GELTP::PL:::Y:T::::::::R:TVHPP:ET::::::LT::::TSE Hmu3011 YV:T:::ET::VD::FL:V::::::::RE:::::::S:M::LT:S:LG:::V:::::::: NP2516A EME:::::SLR::P:::S::::::::S:::::::::::::::KL:DF:::::::H:::E: consensus VRAERQRNELRTRLEELAANTNDVLWMFSADWDELLFINDAYEDVFGQSRDAIEANPNRF #oth 12111212.211..11111112..1.11.11.1.1..21111.212.212122122121. hla0222 :-------:S:R:::TI:SASS::F:::::E:::::::S:IV:E:::V:::TL:RQ:::: Hmu3011 :T:::E:D:TE:::R::::::D:::::::G::S::::L:P:::S:Y:G:V:::::DTDA: NP2516A K::::::::::::::::T::::::::TV::::::M::V::::::IW::PTAEVRE::E:: consensus LDCVRPDDRSAVERAMARLSRGESVDMEYRVNPADNFRRWVWVRAEPIIEDGDVVRIVGF #oth 1.212.1.1121112.21.12...1211.11212222211.1.21..12.1.2..111.1 hla0222 ::V:H:::::Y:::::D:::N:::TLID::LGS::GTTK::R:PG::V::N:T::AVT:: Hmu3011 M:::Y:::VP::::S::A:::::::::::::::GE:YN:::::Q::::V:::E::::::: NP2516A ::GI::K:::KARDG:E::AG::::E:::W:D:SVS:::R::::::::F::::::::::T consensus ARDVTDRYRRERQLAVLDNLLRHNIRNDMNIVLGQAELIADAA------DPEA------- #oth 1.....11..1...1.2.1....1...1.1111.2..1.21221111111.121111111 hla0222 ::::::E:::::::::M::::::T::::::::D:T::R:V::VAAADAF::::WGDSVAA Hmu3011 T::::::N::::::::V::::::::::::TTI:::::::::--:::::::::V::::::: NP2516A ::::::::::Q:::R:::D::::::::T::::::H::::QRG:::::::H:--::::::: consensus -----------------DAPERAATIRRIAEDLLATAEKQREVIDLLRQAACPRTVDIAD #oth 11111111111111111.11121211112121..2.1..1.11121112222121.1212 hla0222 AEGNAEIGPDALAELGA:LQ:H:E::::::S::::::::::G:::::::RGS::A:EV:P Hmu3011 ::::::::::::::::::::::::V:::VG:A::Q:T:::::T:H:F:SP:::T:::MTE NP2516A ::::::::::::::::::::SGMG:VIDS:T:::N::::G:::VEV:SG:NETV:::::: consensus AVDAAL---------------------ENARERYPA------------------------ #oth 2.22.1111111111111111111111121.111.2111111111111111111111111 hla0222 V:EE::GMVVDDCDETVDVTYREPVDG:G:::GE:GDETENVDGMASEETAGEGTTNEET Hmu3011 :::::::::::::::::::::::::::ASV:V:::::::::::::::::::::::::::: NP2516A C:ST:V:::::::::::::::::::::::::::::E:::::::::::::::::::::::: consensus ------------ARVELRQPPNAVAEAHPEINQAIAELIENAIQHAES-APRVRIDVCCR #oth 111111111111221222211211.21211222.21..2...22..11111211121222 hla0222 AGEETAGDNSTLP::SVSY::::K:FT:::LDY:::::V:::LE:::::T::I:::::TT Hmu3011 :::::::::::::T::TTLS:EL::S:LA:VEV:LS::::::VK::::D::T:::TGTV: NP2516A ::::::::::::VPIK::::ST:::::I:K::::V:::L:::::::DG::AE:TAV:E:Q consensus DERIEINIRDNCPPIPENERRVLTDRADMSDIRHGTGLGLWLVYWVADLSDGRLTFDTRA #oth 112.212.2.11..1.12.21111222211122.21.1.......1111.1.211.2121 hla0222 ::S::VS:::::::::VE::Y:I:::WE:D:L::TG:M:::::::::NR:G:D:::::H: Hmu3011 :DE:V:V:D:D:::L::F:Y::::GDKP:::VY:S::::::::::IV::::::IE:T:ND NP2516A G:::T:::I::G:::::::I:P:FTE::L:A:N:::::::::::::::::::E:::GR:: consensus D-EGNVVTLSLPRAA-----------------------------------------RDAP #oth 112..11.111.2.2111111111111111111111111111111111111111111222 hla0222 ::-:::::::V:N:KCGTINEDPRETTLSNRPMTAAVEGADTRIRTDGSTTSEPKR::ET Hmu3011 E:T::TI:VV::::::::::::::::::::::::::::::::::::::::::::::AP:: NP2516A :G::::::::::Q:E::::::::::::::::::::::::::::::::::::::::::--- consensus D #oth 2 hla0222 : Hmu3011 E NP2516A -