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[E] (PotE) COG0531 Amino acid transporters
3 genomes BUD2806 4 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG6220

rrnAC0244

- - - - - -

HQ1125A

HQ1313A

Pairwise sequence scores
Consensus score3545 HQ1313A HQ1125A VNG6220 rrnAC0244
2203HQ1313A 3538 1992 1956 1983
2850HQ1125A 1992 3993 2536 2596
3133VNG6220 1956 2536 3544 3002
3120rrnAC0244 1983 2596 3002 3511

552 symbols
consensus       -MSSQQTRSPAAELGLLDATMIGMGAMIGAGIFVLTGLAAEIAGPAAILVFALNGVVTAF
#oth            121212..1.3.1........1.1................1.1....1...1...2..1.
HQ1313A         MG:E:D::::::S::::::::V:I::::::::::::::::R::::::L:::V:::G::L:
HQ1125A         :-M::G::E:T:::::::::::::::::::::::::::::::S::::L:::V:::I::::
VNG6220         ::::S:::::D:::::::::::::::::::::::::::::::::::::::::::::::::
rrnAC0244       :::KS:::::E:::::::::::::::::::::::::::::::::::::::::::::::::

consensus       TGLSYAELAASIPKSGGGYAFVREIFDDFSSFIMGWMLWFAYMIAGALYALGFAPNFIEL
#oth            .1.......11...1.....11..1.21221.21..11..1..1.........11..1.1
HQ1313A         :A:::::::SA:::N:::::YI::T:SAPIA:V:::TR::T::A:::::::::SS::::F
HQ1125A         ::::::::::::::::::::::::::::R:::LL::::::::::::::::::::::::::
VNG6220         ::::::::::::::::::::::::::G::::::::::::::::::::::::::::::L::
rrnAC0244       :::::::::::::::::::::::::::::A:::::::::::::::::::::::::::L::

consensus       LHVYGGVPPPDAIGAIAVPIIDVDIPAAFGLAFIAVLGLVALNALSTAASGSAETIFTII
#oth            1.1.232221131212121322233131221.11..221.21..1..1...11..21.12
HQ1313A         I:L:W:GL:AGP:-------------WQV:Y:LL::VSF:M::::::E:::G:::LV:LV
HQ1125A         :::::FT:K:G:VN:::L:::S::::VQL:::::::TF::VV:::::::::::::F:::T
VNG6220         :::::L:A:::QV::::::LL:ASV::::V::::::::::::::V:::::::::::::::
rrnAC0244       ::::DV::S::E:::V:::V:::GL:P::L::::::::::::::V:::::::V:::::::

consensus       KVSILVVFIAFGA------TSPLFSGAE--FQPLFPD--GSGAAAILPAMGLTFIAFEGY
#oth            .12..21.12..32221112123.21221112.1122112211221...........1..
HQ1313A         :IG::I:::F::ISAV:::S:AT:F:IDPGAA:TVS:FFSK::TKV:::::::::::Q::
HQ1125A         ::L::LI::L::FLSAGGGEPTS:TLQN:::D:::::::D:S:LS:::::::::::::::
VNG6220         ::::::::V::::::::::::::::::::::::::GV:::G:P:::::::::::::::::
rrnAC0244       ::::::::V:::L:::::::::M:::::::::::::E::::::::V::::::::::::::

consensus       DLITTVTEEVENPRENIPKAIFISLAATVIIYLAVVTVAIGTLGADGLAAAGEAGIAEAA
#oth            ...1......2..11...1...2..21..21.11..2..1.....31.13.1.11112..
HQ1313A         :::A:::::::::KK:::R::::::GV::L:::L::G::V:::::PR:GS:K:KAVV:::
HQ1125A         ::::::::::::::::::::::L:::::::::AL::S::::::::S:::Q:::::::A::
VNG6220         ::::::::::K:::::::::::V::I::::V::::::::V::::::::::::::::::::
rrnAC0244       ::::::::::Q:::::::::::::::V::VV::::::::::::::E:::D:::::::T::

consensus       TSFMPT----GLPIIQNGGALIVFGAVFSTLTALNAVVIASSRVAFAMGREGQLLPSIGN
#oth            1....11111.11.121.1.1.1.......11.......1.....11.......2212.1
HQ1313A         I::::DVAFF:AS:---:A:::A:::::::IS:::::::G:::::Y::::::::PERL::
HQ1125A         :::::::::::::::K::::V:::::::::::::::::::::::::::::::::IG::::
VNG6220         ::::::::::::::::::::::::::::::::::::::::::::::S::::::::::F:Q
rrnAC0244       ::::::::::::::::::::::::::::::::::::::::::::::S::::::::::::Q

consensus       IHHRYGTPFVAIIASAAVML-ASVALPTQSAGNMSSLFFLLSFIIVNVAVIRLRRERPNM
#oth            1..11...11.122.121..121111.1211..11...1..1..1..21..1...11.11
HQ1313A         :::K::::YS:LM::::I::V:TIVA:ISLV::LA:::S::G::V::L:::K:::DQ::L
HQ1125A         L:::F::::::::V:G:::::F::::::A::::::::::::::::::FS::K::::::D:
VNG6220         ::::::::::::::::V:::::::::::::::::::::::::::::::::::::::::D:
rrnAC0244       ::::::::::::LT::I::::G::::::::::::::::::::::::::::::::::::::

consensus       NRPYEIPFYPAPPIIGIALNLVLTGVLVWYLLRTDPLALALSVAWILLGAVAYYALNSRR
#oth            1..111.1.....11.12..12.221122213211211121111.121.222.2112231
HQ1313A         :::F::::::::::L:CV:::::AIFIS:-------VTW:VA:G:L:V:::I:VG:::E:
HQ1125A         T:::K::Y:::::::::I::VL:::::::::TQ::Q:::L:::G::T::LL:::G::WL:
VNG6220         :::::M:::::::L:::::::::SV:::D::V::::::::::A:::V::TA::::HA::Q
rrnAC0244       :::::M:::::::::::::::I:::::IEF:::::::::G:::::::::::V:F::KRI:

consensus       SRSND--------------------------DADTTPISDDIDAEAEDE-----------
#oth            2223322222211111111111111111111.3121122232332331321111111111
HQ1313A         T:TVLSNTQST::::::::::::::::::::::E::::E:STMS:TVE:D::::::::::
HQ1125A         ::::PTPSGGGGGGGSTPDGPTSGSGPGPDS:P:P::T::P:::AIT:SNPSLSGDTDTQ
VNG6220         :AAG::::::::::::::::::::::::::::E:::T::A:AEHTPH:H:::::::::::
rrnAC0244       QQ:--:::::::::::::::::::::::::::REQATAVSE:KP::::-:::::::::::

consensus       ------------
#oth            111111111111
HQ1313A         ::::::::::::
HQ1125A         EAHTHTTAQEEV
VNG6220         ::::::::::::
rrnAC0244       ::::::::::::