3 genomes BUD2809 3 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi VNG1942 rrnAC2985 - - - - - - HQ1853A

Pairwise sequence scores
Consensus score	867	HQ1853A	rrnAC2985	VNG1942
582	HQ1853A	899	487	537
672	rrnAC2985	487	863	608
790	VNG1942	537	608	885

118 symbols
consensus       MDAPEPA-DDWPARPLSPAEARALLDDIADARAVWVMDHDDDVRSAVVPDDAPADAVIDI
#oth            .12.1.2111..21.1.121.211.1.121.2.....1.112..12111.11.2..11.1
HQ1853A         :QD:T:T:TG::DN:::VTT:EE::H::T::I:::::::A:S::QIAI::AQ:-::I:::
rrnAC2985       ::E:::V:::::H::F:::::S::::::DG:V:::::H::N:::::::L::::E::::::
VNG1942         :::::::G::::::::::D::::R:::T:::::::::::::G:::T:::::::::::V:V

consensus       VVETATGFEMYSYTRGQWMDYGTQRKDDDDAPSMAGTLASYRILAGESELAL------
#oth            ....211.1.....2.1........1.121........2..12.1.1.1122111111
HQ1853A         ::::T:::D:::::D::::::::::::NES::::::::::::::T:K:::DVADESVE
rrnAC2985       ::::DAA:::::::S:V:::::::::::S:::::::::D::DV::::::T:-::::::
VNG1942         :::::::::::::::::::::::::H::::::::::::E:::L:::::A:S:::::::