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3 genomes BUD2814 6 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

pNG5056

pNG5137

rrnAC1546

HVO_C0080

- - - - -

HQ3370A

HQ3448A

Pairwise sequence scores
Consensus score2868 HQ3370A HQ3448A pNG5056 pNG5137 rrnAC1546 HVO_C0080
1710HQ3370A 2121 1515 917 1454 1532 1548
1897HQ3448A 1515 2351 1393 1049 1700 1729
1662pNG5056 917 1393 2130 972 1594 1581
1869pNG5137 1454 1049 972 2340 1849 1871
2612rrnAC1546 1532 1700 1594 1849 2869 2581
2668HVO_C0080 1548 1729 1581 1871 2581 2848

371 symbols
consensus       MSGDRRKEIVRHLSEDDLDRLLAESTDEKLTERLIFVKRLYKGATLEDAADDVGRSSATG
#oth            122312111111111111111132223323232121222321111111111111212311
HQ3370A         -MTG:E::::::::::::::::TQTDS::VSK::T:::::D:::::::::::::M:QS::
HQ3448A         --------------------------MNQF:QK--::ES:--------------------
pNG5056         ------------------------------------------------------------
pNG5137         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
rrnAC1546       :::E::::::::::::::::::::::::::::::::I::I:::::::::::::::::G::
HVO_C0080       ::::::::::::::::::::::M::::Q::::::::I::V::::::::::::::::::::

consensus       TRWARRWNKGGLGLLMPNFGGGRPPKLNEKQRQRLLDLLREGQPWKKQEIQHLINQEFDV
#oth            21112211111111121211112211131312221121.11.1..11.......12..1.
HQ3370A         S:::TL:::::::::T:S:::::S::::::::E::::::A::E:::::::::::::::::
HQ3448A         ----------------------::::::::::E::::::A::E:::::::::::::::::
pNG5056         -------------------------------------M::D::::QP::::::::D::G:
pNG5137         :::::::::::::::::::::::::::G:E:Q::::E::::::::::::::::::E::::
rrnAC1546       ::::::::::::::::::::::K::::G:D::::::::::D::::::::::::::E::::
HVO_C0080       :::::::::::::::::::::::::::D:::Q:H::E:::::::::::::::::K:::::

consensus       EFHPVYLPTFLEDLGLSYAIPRTKRPSRPENAEEILDERVADAFDEDDGD-PHNKR-EDD
#oth            11..21.321.22.1......1.1..1..1..1.......2..12124212....2111.
HQ3370A         K:::N:::RL:D:::::::::::E::D:::::D:::::::::::T:::::E::::QP:::
HQ3448A         K:::N:::RL:D:::::::::::E::D:::::D:::::::::::T:::::E::::QP:::
pNG5056         :Y:::::GE::K:::::::::::::::::D::::::::::S::LA::IEE::::::::::
pNG5137         ::::AH:T::::K::::::::Q::::::::::::::::::::::::GYDE:::::::DG:
rrnAC1546       :::::::S::::N:S:::::::::::::::::::::::::G::::DEPD:I::::C::G:
HVO_C0080       :::::::S::::K:::::::::::::::::::::::::::::::::ES:E:::::::DG:

consensus       DDEGWVVDEDIRTDGGTVLGFFDTSHPQPWDNSQRLYTVDDPHITRPLVKIDEPAVGFYA
#oth            2111.22.1111.....11..1.2.....1...1..11.11.111.....111..1....
HQ3370A         S:NE:TF:D:V::::::TV::::V:::::::::::::::TE:T:::::::::T::A::::
HQ3448A         S:NE:TL:D:V::::::TV::::V:::::::::::::::TE:T:::::::::T::A::::
pNG5056         :E::::::::VC::::::V::::A:::::Y:::R::WY:::::HE::::::F::::::::
pNG5137         NE:::I:::E::::::::::::::::::::::::::::::::::::::::L:::::::::
rrnAC1546       :E:::::::E:::::::::::L::::::::::::::::::::::::::::L:::::::::
HVO_C0080       :::::::::E:::::::::::L::::::::::::::::::::::::::::L:::::::::

consensus       LNGESVLQFPPNQEKERICECLEGIREQNPGQRILLVLDNFSSHVCEYTRKRAHQLGIDL
#oth            21....11..32.1..1..21213211111231111121122212123113111211111
HQ3370A         ::::::::::::::::Q::A:F:::::::::-----------------------------
HQ3448A         ::::::::::::::::Q::A:F:E::::::::::::::::::::::AH::E:::E:::::
pNG5056         ::::::VS::ED:T:::::::::R::::::AT::::::::HFA:T::F::::::::::::
pNG5137         IS::::V:::S::::::::SS---------------------------------------
rrnAC1546       :S::::V:::A::::::::::::::::::::::::::P::::::::::::R:::::::::
HVO_C0080       VS::::::::ST::::::::::::V::::::G::::::::::::::::::::::::::::

consensus       VFLPVGSPDLNPIEQVWKSLKWEASPLIVESAAEYRALLTRLFEQLTSQLSFAASWIDNH
#oth            111121112111112211111123121222312221312333223223412224222334
HQ3370A         ------------------------------------------------------------
HQ3448A         ::::I:::H:::::SI:::::::S::::::G:::::V::DEI:TK::D:::::S:::E::
pNG5056         ::::::::::::::::::::::::::::::::NKF:S:VSE:::::::R::::K::::EF
pNG5137         ---------------------:IT:L:TCAN--------::AS:PIN:E:TSCFCPLAHL
rrnAC1546       ::::::::::::::::::::::::::::::::::::::::Q::::::T:::::::::EEY
HVO_C0080       :::::::::::::::::::::::::::::::::::::::::::::::TK:::::::::::

consensus       LGNRLQKLR--
#oth            23543333311
HQ3370A         ---------::
HQ3448A         :NEFI::::::
pNG5056         :SS::RFFS::
pNG5137         IST:SSRSGRV
rrnAC1546       ::GH:::::::
HVO_C0080       :::Y:::::::