Home |  Text search
3 genomes BUD2822 4 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

pNG7256

HVO_2249

HVO_B0303

- - - - -

HQ2096A

Pairwise sequence scores
Consensus score3362 HVO_2249 HQ2096A pNG7256 HVO_B0303
2009HVO_2249 3357 1581 1687 1679
2239HQ2096A 1581 3293 1934 1908
2909pNG7256 1687 1934 3406 2885
2895HVO_B0303 1679 1908 2885 3446

481 symbols
consensus       --MSDANAEQDSV-----VEYDIEDRPPLGEAIPLGIQHVLAMFLGNVAPPLILAGAVGL
#oth            11122332122121111111.2.1.2.1121121..1..111.11221.21112.1.1.1
HVO_2249        :::A:ESG:LG--:::::L::E:D:::::L:S:L::::::SV:IVPAT:VAF:V::::::
HQ2096A         :::::G:TA:::IKNEDL:::G:::T:EFSK:L:::V::L:::::ST::L::VI:S:I::
pNG7256         ::::GPE:::Q::::::::L:::::K::::K::::::::::::::::::::::::::::S
HVO_B0303       MTSTS:D::S:::::::::L::::::::::::V::::::::::::::::::::::::::S

consensus       GNGDTTFLVQMALIVAGAATLVQAYPIGPVGARLPIVMGTSFAFLGPLIGIGNQFGIAAV
#oth            1322.112...1.111.3..2..1121..1.1...1.....12.1111121.321.11.1
HVO_2249        :VA::AYV:::V:LFS:L::V::::AV::::S::::::::::T:V:AATT::IDY:LS::
HQ2096A         ::S:::YI:::::L:::V:::::V:Q:::I:::::::::::AI:VS:::SV:TE::L::I
pNG7256         VT:E:::::::::::::I::I:::::V::::::::V::::::::::::::::::::::::
HVO_B0303       VS:Q::::::::::::::::::::F:::::::::::::::::::::::::::Q:::::::

consensus       FGASLLAA-PVEVLIGVQFDRIRRFFPPLVTGIVVMLIGLTLIPTGMNYAAGASAGPGAA
#oth            ..121211111.221.231.11322.......1..111..1.1.2112.1..11111112
HVO_2249        :::I:VTGFL::G:::W:::::KP::::::::L::VI:::Y:V:V::D::::---:V:::
HQ2096A         :::VII::::I:::::YV::D:E:L::::::::::::V::::::IALQ:S::---T::TD
pNG7256         :::::::::::::IM::S:::F:::::::::::::::::::::::::::::::::::S:E
HVO_B0303       ::T:::::::::LVM::TL::FQKY::::::::::::::::::::::::::::::::S::

consensus       GYGSFANLGLAALVLAVAVGLNQFFDGFLRVISVLVGIIVGYLAAIALGVVDLSAVAAAA
#oth            21.123.1...1..13.1221.1111.12.22111.1121..21.21..21.111113.1
HVO_2249        D::ATH:I:::::::G::IA::L:T::IT:LL:T::::A:::AV:VP:::::F:PI:D::
HQ2096A         TF::LR::::::::F:::L:V::L::::M:SAA:::AV:I::::::P::LL:::::GS::
pNG7256         :::::V:::::G:::I:T:::::::E::::::::F::::::::::L:::::::::::::G
HVO_B0303       :::::::::::G:::V:T:V::::::::::::::F:::V:::V::::::M::FT:::T:G

consensus       WFTVPRPLAFGLAFEPSAILTVAFLYIITGMETIGDISGTTSATGRNPTREEFRGGLVAD
#oth            .222.3.121.13.1.1111121.1121121..11.1..11212..11121.21...11.
HVO_2249        ::AI:Q:G:::VT:::VP:V:F:::FLVSA:::V::M::I:A:E:::::D:::::::FT:
HQ2096A         ::SF:::::Y::S:::::::IIG:A::::S::::S::::::ESV::Q:RT::TQ::::::
pNG7256         :V:::V::KY::::::::VV::::::::::::::::::::V::::::A::::I:::::::
HVO_B0303       :I:::T::R:::E:P:::V:::::::V:::L:::::::::V:::::::::K:::::::::

consensus       GVMSAFAAVFNALPNTSFSQNVGLVNFTGVASRYVVGIAGVVLAVLGLVPKVGAVVSAMP
#oth            11..21122.1.1.1........111....1..1.1..1..1.311.12...1.1.121.
HVO_2249        :L::SV:S::G:F:V::::::::I::::::M:::::::::::::::::S:::::A:ATI:
HQ2096A         :::::V:GI:::F:::::::::::IS:::::::S:::::::F:I:F::::::A:::::::
pNG7256         ::::V:G::::::::::::::::::::::::::::A::G::::LA::FI:::::::::::
HVO_B0303       A:::::::L::::::::::::::::S::::::::::::G::::V:::F:::::::::V::

consensus       DAVLGGAALILFAMIFSSGARLITQNVTLDHRNSTILAASLALGLGVAFRPDALQNLPSE
#oth            21.1..1212111.1211.2.2121222.12..2112.3.122.1..12.112.221.21
HVO_2249        S::F:::V:LMAG:VAA::V::VFLHTN::R::MVVV::::G::::::T:::::SG::QA
HQ2096A         NP:::::GVV::G::I:I:L:M:A:GA::TQ::L::I:V::VI:V::EW:S:::AQ::::
pNG7256         ::::::G::::::::::::::::::::E::::::::::M:M::::::::::EI:::F:::
HVO_B0303       ::::::G::::::::::::::I::::::::::::::::L:M:F::::::::EV:::F:A:

consensus       AQTLFGSALITGGLTALVLNAVLPGGGVGLGPTE-T-GL-PEDV-----DEGDGAAPVDD
#oth            111111121121131..2..312.1222222122212112223222222332213122..
HVO_2249        :A:F::EPV:VTA:::::::TLA::DQSP:FDAA:-:--:D:S:AADAA:GA::R:ST::
HQ2096A         ::V:AT:G::M::V::::::::::EN:DSGT:SV:-:--:----:::::-M::PI:ED::
pNG7256         V::::::::V:::MA::I::I:F:::S::T::::Y:A::E:DP::::::ET:A::P::::
HVO_B0303       V::::::::V:::F:::A::V:::::::::::::H:D::D:::LTELSSS:SSPS:::::

consensus       -
#oth            1
HVO_2249        :
HQ2096A         :
pNG7256         D
HVO_B0303       :