3 genomes BUD2827 3 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - pNG4012 HVO_C0017 - - - - - HQ4026A

Pairwise sequence scores
Consensus score	2231	pNG4012	HVO_C0017	HQ4026A
1263	pNG4012	2132	870	779
1572	HVO_C0017	870	2313	1006
1482	HQ4026A	779	1006	2343

331 symbols
consensus       -------------MNTANRAQRAALFIDKGGVGKTTSAAHLGVAL-RNRGHNVLLIDLAG
#oth            111111111111112122222.1.2121...11....1..111.11222.22...1....
pNG4012         ::::::::::::::M:SSEIK:I:TYVE::::::::::::IA::A:H::::E:::V::::
HVO_C0017       VYMIPYMNLYMPKQ::::::L:::::M:::::T::::T::::E::A:EY:L:::::::::
HQ4026A         ::::::::::::::IRVTST::::V::::::T::::::::::::::NQL:SS::::::::

consensus       KQGDLADAFGIHDDVRRDAATDDAFP---NISTVFGNRWSDIAENV--DDAVERMIFETD
#oth            1.1..1221.222212222111.2211111.1111122.1221121112111111221..
pNG4012         T:N:::TH::L--SIVDEE::::GVSIDAP::A:::DD:AFLRD:I::::LLD::T:P::
HVO_C0017       :::::SKQ:::::E::--::E:::W::::::::::AEE::T:::K:::P::::D::W:::
HQ4026A         ::::::::L:VFE::Q::IS:E:D:::::::A:TM::::::V::M:GGKE::::LVY:::

consensus       EGVDLIPAHPGLDGADADLANV-NVEERYNRLDEFLDDHVAPLDRYDVVIIDLPGLANNI
#oth            111.....111.112.21.11112111..21.12.1212.211221.1112.1..121.1
pNG4012         ::P:::::D:::G:::NN:::::PL::::QK::G:VE:L::--:K::L::F::::KED::
HVO_C0017       :N:::::::E:::SV:D:::S:::::D::T::::::TNY:D::G-::::LL:::::T::V
HQ4026A         S:::::::::D:::L::::G:IDD:Q::::::RL::::::E::E:W::I:::M:::::::

consensus       TLNGLFAARNVVAPLKMGAFERRQLRQLDADLDEIRADLDVDLQLAMVIPNIYDRRANLD
#oth            11...1.121.11.121.2..22.122.211121.2122.1112.111112211212112
pNG4012         A:::::::::::::::P:::::D::QK:::T:E::S:::::::G::LI::T:ISSQET:S
HVO_C0017       :::::::TGR:I:::T::E::E:::D::V::I:::V:GF::::E::::L:SM::K:::V:
HQ4026A         :Y:::W::Q:::T:VS::S::LK:A:S:KN::QK::SSY:QEV::T:::A:L::::T::H

consensus       EDILARLREEYPDRIAPEPITDSQDIRNAQAEGRTLFAVPDDELLATAKRARDAYRANAA
#oth            22211122111122211111121121212121.111.1..11..11.111111.122112
pNG4012         :SFVEYVT::::EIVG-::V:KTA::G:N:NA::::::::::::Y::G::::E::S::TE
HVO_C0017       TEM::::::Q:::::::S:::S::GVP::::::::V::::N:::::::::VK:::TDA:T
HQ4026A         S:::::FED:FGSVM:::Y:V:::Q::TVTE::QS::D:::E:::S::ED::::F:R:::

consensus       ALLQRL-------------RNRSATASPETN
#oth            2..2.11111111111111221221212112
pNG4012         Q::S:::::::::::::::TD:---------
HVO_C0017       :::::V:::::::::::::DGET::::T:::
HQ4026A         E::T::RQGSRSTPTQSQS::::Q:R::::Q