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3 genomes BUD2837 5 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi

VNG5020

VNG6020

VNG6229

 - -

Hbo3066

 - - - -

HQ1771A

Pairwise sequence scores
Consensus score2159 HQ1771A VNG6229 VNG5020 VNG6020 Hbo3066
1052HQ1771A 2461 612 936 936 979
809VNG6229 612 1432 735 735 711
2032VNG5020 936 735 2161 2161 1294
2032VNG6020 936 735 2161 2161 1294
1393Hbo3066 979 711 1294 1294 2195 

334 symbols
consensus       MTDHRPSPE--------EEQTTANEERTVSNGRYLYCVVDT-----ESSESATLSTTGVD
#oth            112322223112122222222233323323211121131111111122332332223123
HQ1771A         :::DSF:SV:EKSSNVGD:SQ:DARSTNID::::I::L:::GSHMS:PPSGDEIG:D:IE
VNG6229         ---------::::::::------------------------:::::--------------
VNG5020         ::::::::::::::::::::::::::::::::::::::::::::::T:::::::::::::
VNG6020         ::::::::::::::::::::::::::::::::::::::::::::::T:::::::::::::
Hbo3066         ::EPS:TSAAEQSADAT:QS:GSSG:QA:TD::::::F::::::::::AD:ND::VL::G

consensus       DNPVYVVEADG--------VGAVVHDCETVYETEDLEQVKRWLLTHQQVVDAAGDAFGTP
#oth            332222222321111111111121121232122232221322323113111112332211
HQ1771A         GASPSI:H:K:DVIGSSGR::::::S:TQT::ASN:AT:QQRI:S::R::::::SIYD::
VNG6229         -----------::::::::-----------------------------------------
VNG5020         :::::::::::::::::::::::::::::::::::::::::::V:::::::::S::::::
VNG6020         :::::::::::::::::::::::::::::::::::::::::::V:::::::::S::::::
Hbo3066         ESS:::I:TES:::::::::::A:::::A::D::SP:::TQ:V:R::H::::::EV::::

consensus       LPMRFDTVLEGGDASIERWLEDNYDGIRDELASFAGTWEYRINLLWDSAPFEATIADRDD
#oth            111..1.121...21233.12121232131.321..2....13.2..232..232222.1
HQ1771A         ::L::N::F::::Q:VQA:VH::::Q:YSA:MTL::::::::G:V::ANR::SLAVKT:E
VNG6229         --::::::FA:::SALTD::A:THPRL:T::DG:::C::::VT::::PQ::::HVTAT::
VNG5020         ::::::::::::::::::::::H:E:F:::::::::V:::::::::::::::E:::::::
VNG6020         ::::::::::::::::::::::H:E:F:::::::::V:::::::::::::::E:::::::
Hbo3066         :::::N:II:::::::SQ:VHE:H:T::EA:T::::::::::R:H:::SA:::E:::Q::

consensus       RLQELRQRQQQAGAGTKFLLEKQYDQRLAELKRERRSELADQLKEAIEPVVNDLTEQDT-
#oth            3.131231132122.13...1..113..211122..22.233.32112.1122321.121
HQ1771A         E::RIEDQRTS:NE::A:::N:::KR:::T:RS:::N::IEV:QTSV::LAAEI:::GSQ
VNG6229         T::A:EA::AE:D:::T::::::::A::::RR:A:::A::SD:SA:V:::ATQVAS::::
VNG5020         ::R::::::::S:::K:::::::S::::Q:::::::T::::::::::T::::::::::::
VNG6020         ::R::::::::S:::K:::::::S::::Q:::::::T::::::::::T::::::::::::
Hbo3066         Q::D:QR:RK:::S::S::::::::K::R:::QQ:::D:TAT:R:S:S:::TEMI:::P:

consensus       -------------------------NTPLQDEHSSIDKEQIARFAVLADEDDETALGDRL
#oth            111111111111111111111111121112123321221212.2..112121.21..21.
HQ1771A         DIDIGGLSDREIKGNDGETDTSDCET:SDTKRNEDE:::L:E::::RVSA:A:A:::S::
VNG6229         :::::::::::::::::::::::::T:S:R::SV:ERHTP:::L::::P:T::S:::SQ:
VNG5020         ::::::::::::::::::::::::::::::::::::E::::V::::::::::::::::::
VNG6020         ::::::::::::::::::::::::::::::::::::E::::V::::::::::::::::::
Hbo3066         :::::::::::::::::::::::::SS::T:DTTA::G:PV::V::::::A:::E::N::

consensus       DTIVEREGVEIRFTGPWPPYTFAPDIGK------
#oth            .321221..212............1112111111
HQ1771A         :EF:D:D::SVT::::::::::::N::-::::::
VNG6229         :D:AA:D::T::::::::::::::::CTDEPNQA
VNG5020         :::::H::::::::::::::::::::::::::::
VNG6020         :::::H::::::::::::::::::::::::::::
Hbo3066         :GPA:Q:::S:K:::::::::::::L:-::::::