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3 genomes BUD2842 5 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi

VNG5034

VNG6033

VNG6246

 - -

Hbo3078

 - - - -

HQ1779A

Pairwise sequence scores
Consensus score907 HQ1779A Hbo3078 VNG5034 VNG6033 VNG6246
493HQ1779A 1449 432 442 442 412
608Hbo3078 432 1054 551 551 477
850VNG5034 442 551 906 906 528
850VNG6033 442 551 906 906 528
579VNG6246 412 477 528 528 845 

188 symbols
consensus       ---------------------MADPANDRP--------------------ERE-------
#oth            111111111111111111111121222.21111111111111111111111232212221
HQ1779A         MSNKTKCDDRWNTSNYSHQYVIDHDTE:::AWWSSDNYDKYDVDSLVVQSDSNRHNICSS
Hbo3078         ::::::::::::::::::::::S:Q:::P:::::::::::::::::::::::DDINDVVS
VNG5034         :::::::::::::::::::::::::::::S::::::::::::::::::::::::::::::
VNG6033         :::::::::::::::::::::::::::::S::::::::::::::::::::::::::::::
VNG6246         ::::::::::::::::::::::D::VA:Q:::::::::::::::::::::D--:::::::

consensus       ----------EGGDDDETP-------PASDANPSP---SANSIGLSNAQTRAREAAQELL
#oth            22222222222232211111111111323312321222233211132..31.111131.1
HQ1779A         SFNPMMIRTDG:R:SE:SEMMSEKRGNKNQ:ETVSETETVE:::IIE::EC:KT::K::F
Hbo3078         PTEIEGMPSA:HV::ESSE:::::::Q:TS:EAM:NQS:DSP:::GD::K::::V:E:::
VNG5034         :::::::::::::E::::::::::::::::G:::::::::::FT:::::::::::::D::
VNG6033         :::::::::::::E::::::::::::::::G:::::::::::FT:::::::::::::D::
VNG6246         ::::::::::---GT:::::::::::DGDT:GS:::::----:::AD::A:::::VA:::

consensus       EHQFEGIIKAESNDDG-WRTVVEVVERNAVPDTQDIIGRYEITLDGTGDVTGYELLERYR
#oth            .13.212.12.131223..112.1...2..........1...1.131.3.11...21..1
HQ1779A         ::D:KSV::V:AD:NNE::::I:L:::R::::::::::::::N:TS::N:A::::V:::Q
Hbo3078         :YK::::::I:AT::DS::::::::::S::::::::::C::::::E::S::S::::R:::
VNG5034         ::::::M:::::::E:::::::::::::::::::::::::::::::::::::::::::::
VNG6033         ::::::M:::::::E:::::::::::::::::::::::::::::::::::::::::::::
VNG6246         ::P:D:::T:::GA::G::ILA:::::S:::::::::::::::::DG:R::::::R::::

consensus       RGDMKEEL
#oth            ..1....1
HQ1779A         ::::::::
Hbo3078         :::::::M
VNG5034         ::::::::
VNG6033         ::::::::
VNG6246         ::E:::::