3 genomes BUD2852 3 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnB0078 - Hbo1871 - - - - HQ2093A

Pairwise sequence scores
Consensus score	1243	Hbo1871	rrnB0078	HQ2093A
757	Hbo1871	1463	151	373
328	rrnB0078	151	378	290
837	HQ2093A	373	290	1284

195 symbols
consensus       -----------------------GDSIRSFRTKRGRARFDDDYLHFQESFSGTIRNLY-N
#oth            111111111111111111111112212211211112222222122221112122222112
Hbo1871         MTEEAEPAQQNAPPEPATSADER:::V:::::::::CLV::T:::VE:::V::Y::M::D
rrnB0078        :::::::::::::::::::::::-----------------------------------:-
HQ2093A         :::::::::::::::::::::::MP::E::P::::T:::SE::VY:::::::Y:NS::R:

consensus       YWQRG-WWGRFAFLAALFAPLIGI---LWVT--DALGDGALIHIAAICGLIIILAFRRIA
#oth            112211122222122221122212111211211222222222222122222222222222
Hbo1871         ::SS:::V:::V::::M::::Y:LGTA::::RE:P::TP:::FLS::GVFV::S:::::V
rrnB0078        -----:------------------:::----::---------------------------
HQ2093A         :::::T::SST::VGH:::YP::::::W::V::S:VY::NFL::::L::::LV:YVVNY:

consensus       RGFRSADRIRLADIRQVKANRGIKGLTRPRLVVRYTDGGTTRKRRVNLPSLYTSGGEAVY
#oth            212212211212222212222121.1.11..111.111.1.2..111.......11.211
Hbo1871         Q:YT::S::P:::V:T::S:::T::::S:::L:E:DAD:A::::VLM:::::::D::ERF
rrnB0078        ----------------------MM::::S:::I::::::::C:::::::::::::::T::
HQ2093A         :::::P:::::DT:E::S:TD::::I:::::::::::::::Y:::::::::::::R::::

consensus       ERAQEAFAERGF---
#oth            .2.1121211.1111
Hbo1871         :E::RTLSAA:LDVK
rrnB0078        :::::::::::::::
HQ2093A         :Q:R:S:T:::::::