3 genomes BUD2853 3 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnB0140 - Hbo3269 - - - - HQ2152A

Pairwise sequence scores
Consensus score	826	Hbo3269	rrnB0140	HQ2152A
428	Hbo3269	792	238	266
580	rrnB0140	238	882	390
521	HQ2152A	266	390	1001

147 symbols
consensus       ----------------------MRRAIRYIISACVGLAVMALAAALANGNH---LIMLSL
#oth            1111111111111111111111..122..11.22..11.211222212122111121111
Hbo3269         :::::::::::::::::::::::::S:::AL::V:::G::::T:VVD:::T:::GL:AMI
rrnB0140        ::::::::::::::::::::::::P:L:::::V::::::T:::V:F:TAD::::::::::
HQ2152A         MYAYPTENMQQLVYSVPVRSSD:::YV:::::TI::I::SIAVSM::Q:ESSHS:VI:::

consensus       PLIYGAVTSLALAHKQRWIEIRARNQRASGRKLGAIGGGIGAGTGSLLLQASIPAGIAGY
#oth            122..21.112.1111222212222222.2111.211..2..21111...2.211.2..1
Hbo3269         :::::TT:AF::DNVEL---:::TSGEG:S:TV:ML::::::::SVG:::Q:LA::::::
rrnB0140        LPL:::::::I:::::Q:VSLSR::PTR:T::::::I::L::F:::::::::V:::F:::
HQ2152A         :VV::V::::L::::::Y:::HSSQ:::::S:::G::::T::LV::::::V:::V:V::F

consensus       GLMLLGMAGTIADVDQASDL-------
#oth            ..111...211.211221221111111
Hbo3269         ::FVF:::L:::E:GSQT:::::::::
rrnB0140        :::::::::A:::S::::STDQATTSD
HQ2152A         ::::::::V:V:S::LY:PS:::::::