3 genomes BUD2860 3 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - - HVO_2432 Hbo2139 - - - - HQ2732A

Pairwise sequence scores
Consensus score	2233	HVO_2432	Hbo2139	HQ2732A
1824	HVO_2432	2274	1527	1502
1851	Hbo2139	1527	2204	1612
1862	HQ2732A	1502	1612	2220

311 symbols
consensus       ---------MDRRTYLKGGAGVAAGGLIAGCTGGGNGESDETETDSSADTETTDDTESGE
#oth            111111111.1..111.21..12.1111...1.112121221111111211112212111
HVO_2432        MVLCYLRAV:E:::F:::S::A::AFTL:::L:::E:::ES:::T:TTEA::::S:::::
Hbo2139         :::::::::::::::::T::::V::::::::::::::G:::::::A:::::S:SGETT::
HQ2732A         :::::::::::::S:I:S::::I::::::::::SDSESESTATA::::G:D:PT::V:DT

consensus       ATESAESVVPSNVVIGSDIPYRPFEYETTSGELTGFDVDIAQAVFEDQLGVNYEFKPTSF
#oth            211221111.1211..............11.1.1....1..1...121..12....1...
HVO_2432        :S:-----L:ETIT::::::::::::::IE:D:::::::::E:::DG:::ID::::::::
Hbo2139         Q:::E::::::K:::::::::::::::::::::K::::E:::::::EE:::E::::K:::
HQ2732A         E:AT::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       DSIIPSLNNGNFRIIMSAMTINDQRAEKVDFSDPYFTAYQTVIVRADSSISSREDLRGTT
#oth            ........111...........12.211....1........1.112..1.1.11..2.11
HVO_2432        :::::::::N::::::::::::::::QE:::::::::::::::::Q::D:Q:::::::::
Hbo2139         ::::::::S:R:::::::::::EK:K::::::E::::::::::IKK::::::K:::K:A:
HQ2732A         :::::::::::::::::::::::T:D:::::::::::::::I:::::::::::G::E::V

consensus       VGVQKGTTGANAAEELQEEFDGNLELNRYDQIPAAFQALINGQVDAVINDNTVNAEFANN
#oth            1.........2..1..121...211.12...112.....2...12.11......1..122
HVO_2432        ::::::::::D::L::::::::E::::Q:::VTG:::::V::::V::::::::::::V::
Hbo2139         I:::::::::S:::::KT::::D:T:KK:::::S:::::::::I::IV::::::S:::DK
HQ2732A         :::::::::::::::::SD::::I:::::::::::::::K::::S:::::::::::::SQ

consensus       --EDNVRFLEGEGAAAEAGENAPPYLTLTVENYGIAFRQDDDEFRQRVNEALAAIKENGT
#oth            1111212.11.....112.11..1...........1..21.1..121.1....11.1...
HVO_2432        QG:GE::::Q:::::::S:::::D::::::::::::::::::::::::::::::::::::
Hbo2139         ::R:D:V:::::::::AE:::::::::::::::::G::KA:::::KK:::::::V:::::
HQ2732A         :::::IE:I::::::V:::QD:::::::::::::::::E::S::LE::D::::T::N:::

consensus       YDEIYSEYFSG
#oth            .....11..1.
HVO_2432        :::::A:::E:
Hbo2139         ::::::T::::
HQ2732A         :::::::::::