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3 genomes BUD2871 3 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi
- -

HVO_2644

Hbo2198

 - - - -

HQ3023A

Pairwise sequence scores
Consensus score1988 HQ3023A HVO_2644 Hbo2198
1186HQ3023A 2490 743 808
1359HVO_2644 743 1992 833
1239Hbo2198 808 833 1948 

338 symbols
consensus       --MADDDARLDDIAGRRQSFLRALAERARDKRELADDLDISRSTVDRAIRELLDAGLVTR
#oth            1112122221221222.2111111222221.11.221112.......21...111..112
HQ3023A         :::H:S:HS::T:V:K:::::ES:EKNSK::C::ET:::::::::::G::::SN:::::S
HVO_2644        VNGDETS:Q:SHLLV::S::I::::::P::::G::::::T:::::::VV::::::::AE:
Hbo2198         ::::::GR:IE:::LS:EQV:::VVLE:HS::::TEVVES::::::::::::::V::::Q

consensus       ANGRYRLTLAGRCALEAADACHRRLQQVRSARDLLSCLPADAPLDDAFLDGADVATAMPE
#oth            2211.21.11.11..2.222212111212.1.11.12..21211121..1..212122.1
HQ3023A         T:SD:Q::::::T::T::QQY:::::EID:G:::::T::SGIDIA:V:::::SY:Q:S::
HVO_2644        :E::::::CV:::::G:Y:E:LDS:RG:::::::::M::::::::P:::T::T:H:ST:D
Hbo2198         RD:::EA::::E:::::VE:F:E:M:::S:::GV:G:::P:T:::S::::::::Y:T:::

consensus       IPDRAIQRLFDSIEDADRLRGVAPVALAGQLRPFYAAATANGTDVEMVIDDDVLDRLAAA
#oth            1..22.12..2.1.2.2221..1.11.2.2.21..221112112.11.21211212.2..
HQ3023A         ::::I:RY::::::S::VF:::S::::::Y:DE:::VT:::::I:KH:V:E::VET:L::
HVO_2644        :::S:::E::S:V:::E:VY:::::::V:::::::ET::EG::V:::::A:ELF::::::
Hbo2198         M::GV:::::E:::G:CH::::::AV:S:H:K:::D::K:SDA:::::L:S::::Q:I::

consensus       PDLRAGFANQLRHDRVTLLRGNVPFRFGLWITEA-EAGIVVYTDTGVRGVIRNDTDAAIQ
#oth            .22122122.121.111121.211.21.1.11121.1.2.1.....11.112..111.21
HQ3023A         :E::S::IK:AQ::::S::S:DIS:NY:V::VDDI:::::F::::::::I:I::S:::::
HVO_2644        ::SH:VI:::::::S:::Y::E::::::::V:::::::L::::::::G::A::::E::V:
Hbo2198         :ST:DI:LS::TD::I:IS::::::S:::::::T::V:V:::::::I::::V::::T:YS

consensus       WAEAQFEALRADADRI--------------------TLDSLDDIDDDE------------
#oth            ..2211.21211.22111111111111111111111122121212212111111111111
HQ3023A         ::HN:W:SVM:::TS:HQSTPQVANSEISGDSRMEN:VS:TE:::V:SNLETNSNTETTD
HVO_2644        ::T:::::::EN:::R::::::::::::::::::::::::::EVT:NG::::::::::::
Hbo2198         :::RR::E:S:::SE:::::::::::::::::::::---TM:G:EL::::::::::::::

consensus       --------------------------------------
#oth            11111111111111111111111111111111111111
HQ3023A         KTGAQTEQTAESDSASPHEDQTTQADTETSEFQDNSGS
HVO_2644        ::::::::::::::::::::::::::::::::::::::
Hbo2198         ::::::::::::::::::::::::::::::::::::::