3 genomes BUD2882 3 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - - HVO_0299 Hbo1183 - - - - HQ3258A

Pairwise sequence scores
Consensus score	1713	HQ3258A	HVO_0299	Hbo1183
983	HQ3258A	1880	491	644
1030	HVO_0299	491	1650	610
1080	Hbo1183	644	610	1638

255 symbols
consensus       ----MARRVPEFALIIGVFFGLSALVSGAVLRWALFAIICVAAVGCYPFAAFGVLRDDDP
#oth            11111221.....111...1..112.11211212.1122212.122...2...11.121.
HQ3258A         MSISTDQY:::::I:V::::::ATV:::II:::G:T:T:::C::SS:::I::::V::TN:
HVO_0299        ::::::E:::::::L::::L::::T::A:::SG:::RPLLFG:AV:::::::::::SE::
Hbo1183         :::::S::::::::::::::::::::F:L:FQ:S::::VV:::::T:::V:::L::::::

consensus       AAAIPPRWVLGAGVAIGLLGAAGALHA----RASVEALPDAAFIGLALVLPPAAYAVRHG
#oth            21211.11.122.121.1.1121222211112211211222211122111..11...111
HQ3258A         T:T:R:::::SI:TV::M:::V:TF::MLGGQD::T:TVSSL:::FI::S:::G:::H::
HVO_0299        SE:L:::V:::L:::::::T::A:VLE::::::T::P:-:GV:AAVVVS:::V:::::F:
Hbo1183         ::V:::D::FF:::FW::::VF:V:VD::::NV:LS:::F::T::::::::::::::::D

consensus       ADVNPLSPQQTLACCLIAGAACLAAGLFS--PRLALIDALLGFGVGISGALYATARGLRL
#oth            111..1112111121112122212211211112.221211.122112111...1...212
HQ3258A         VNI::FT::V:AGG:::I:VG:VF:::::::--:P::GV:::T:::::::::::::::T:
HVO_0299        ::::::::V:S::::AVV:T:F::LA---:::::GTTS:::::VL:L::::::D:::F:P
Hbo1183         :::::::AT::::LG:::A:SL:LV::V:GR:I::V:::V:---:AVAAG:::::::V:F

consensus       TARTRRAGAAAGAVIGVAIAAAGVARGERLGS--------WLAVGAAAALTPSLYVALAR
#oth            121121222121212.112112.112.221111111111112211212.11...111.21
HQ3258A         :QQ:KQRV:IISG:::LT::FI:I:G::YI::NGTVNGGE::F:::TL::A::::I::TG
HVO_0299        :H:QQ:::I:::VFV:::V::::::T:LP:::::::::::TT:TAV::::::::S:::::
Hbo1183         D:::::NSV:V:::L:::LI:V::V::G::TD:::::::::VL::S:V:F::::::V:S:

consensus       NRRQQRRC-----RQ
#oth            2222222211111.2
HQ3258A         GQTT:QT:SWPFK::
HVO_0299        ::::PH:F::::::S
Hbo1183         -----:SY::::::-